RNA–Protein interactions for RNA: ENST00000474455.1

SMIM11A-204, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,857 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-204ENST00000474455 TFAP4Q01664 338 aa24.16■■□□□ 1.46
SMIM11A-204ENST00000474455 STK3Q13188 491 aa24.16■■□□□ 1.46
SMIM11A-204ENST00000474455 RASA3Q14644 834 aa24.16■■□□□ 1.46
SMIM11A-204ENST00000474455 SH2B1Q9NRF2 756 aaPredicted RBP24.16■■□□□ 1.46
SMIM11A-204ENST00000474455 PI4KBQ9UBF8 816 aa24.16■■□□□ 1.46
SMIM11A-204ENST00000474455 ATRNL1Q5VV63 1379 aa24.16■■□□□ 1.46
SMIM11A-204ENST00000474455 POTECB2RU33 542 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 SH2B2O14492 632 aaPredicted RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 IFIT3O14879 490 aaKnown RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 SHMT1P34896 483 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 RBM10P98175 930 aaKnown RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 SHROOM1Q2M3G4 852 aaPredicted RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 FKBP1CQ5VVH2 108 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 RAB11FIP4Q86YS3 637 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 GDPD2Q9HCC8 539 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 FAM13BQ9NYF5 915 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 TSPY2A6NKD2 308 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 PCP11498 1178 aaKnown RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 SYT1P21579 422 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 ST3GAL1Q11201 340 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 PRAMEF18Q5VWM3 479 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 ZNF444Q8N0Y2 327 aaPredicted RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 NECAB1Q8N987 351 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 L3MBTL3Q96JM7 780 aaPredicted RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 PKNOX2Q96KN3 472 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 LY9Q9HBG7 655 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 IL17RBQ9NRM6 502 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 ADARB2Q9NS39 739 aaKnown RBP24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 CNPY2Q9Y2B0 182 aa24.15■■□□□ 1.46
SMIM11A-204ENST00000474455 TMEM67Q5HYA8 995 aa24.14■■□□□ 1.45
SMIM11A-204ENST00000474455 DLK2Q6UY11 383 aa24.14■■□□□ 1.45
SMIM11A-204ENST00000474455 FAM83AQ86UY5 434 aa24.14■■□□□ 1.45
SMIM11A-204ENST00000474455 MYRIPQ8NFW9 859 aa24.14■■□□□ 1.45
SMIM11A-204ENST00000474455 GGA3Q9NZ52 723 aa24.14■■□□□ 1.45
SMIM11A-204ENST00000474455 SCN4AP35499 1836 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 MIGA2Q7L4E1 593 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 TEPSINQ96N21 525 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 WDR19Q8NEZ3 1342 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 ZC3H4Q9UPT8 1303 aaKnown RBP24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 ANKRD1Q15327 319 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 FBXL16Q8N461 479 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 CRACR2BQ8N4Y2 399 aaPredicted RBP24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 EHD4Q9H223 541 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 ANGEL1Q9UNK9 670 aaKnown RBP24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 TNKSO95271 1327 aa24.13■■□□□ 1.45
SMIM11A-204ENST00000474455 AKR1B1P15121 316 aa24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 RRP1BQ14684 758 aaKnown RBP24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 SEC23AQ15436 765 aa24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 ENAHQ8N8S7 591 aaPredicted RBP24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 TMEM87BQ96K49 555 aa24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 ZSCAN10Q96SZ4 725 aaPredicted RBP24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 DEFB129Q9H1M3 183 aa24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 NAP1L2Q9ULW6 460 aaPredicted RBP24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 COL2A1P02458 1487 aaPredicted RBP24.12■■□□□ 1.45
SMIM11A-204ENST00000474455 ADCY5O95622 1261 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 TSPY3P0CV98 308 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 TSPY8P0CW00 308 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 GNL3Q9BVP2 549 aaKnown RBP eCLIP24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 SPTLC3Q9NUV7 552 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 RXRAP19793 462 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 EPHX2P34913 555 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 METTL16Q86W50 562 aaKnown RBP24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 FOXP4Q8IVH2 680 aaPredicted RBP24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 CCDC83Q8IWF9 413 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 UBAC1Q9BSL1 405 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 FUCA2Q9BTY2 467 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 MYL10Q9BUA6 226 aa24.11■■□□□ 1.45
SMIM11A-204ENST00000474455 TCHHQ07283 1943 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 KLF18A0A0U1RQI7 1052 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 CCT2P78371 535 aaKnown RBP24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 NOLC1Q14978 699 aaKnown RBP eCLIP24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 WTAPQ15007 396 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 CLEC10AQ8IUN9 316 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 SWAP70Q9UH65 585 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 USP25Q9UHP3 1055 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 GREB1LQ9C091 1923 aaPredicted RBP24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 MYH4Q9Y623 1939 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 WDR90Q96KV7 1748 aa24.1■■□□□ 1.45
SMIM11A-204ENST00000474455 PDIA3P30101 505 aaKnown RBP24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 TNNI2P48788 182 aa24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 JAG1P78504 1218 aa24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 NBPF12Q5TAG4 269 aaPredicted RBP24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 IQCA1Q86XH1 822 aa24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 ZNF287Q9HBT7 754 aa24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 GTF2F1P35269 517 aaKnown RBP eCLIP24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 TNFAIP1Q13829 316 aa24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 FOXD4L6Q3SYB3 417 aaPredicted RBP24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 RCSD1Q6JBY9 416 aa24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 FOXD4L3Q6VB84 417 aaPredicted RBP24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 FZD1Q9UP38 647 aa24.09■■□□□ 1.45
SMIM11A-204ENST00000474455 GDF11O95390 407 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 LIFRP42702 1097 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 EVCP57679 992 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 SCRN1Q12765 414 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 TATDN1Q6P1N9 297 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 NFXL1Q6ZNB6 911 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 NEDD1Q8NHV4 660 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 TRIM34Q9BYJ4 488 aa24.08■■□□□ 1.45
SMIM11A-204ENST00000474455 NCOA5Q9HCD5 579 aaKnown RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms