RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 NUCB2P80303 420 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 BIRC2Q13490 618 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 TTC31Q49AM3 519 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-209ENST00000474157 CCDC30Q5VVM6 783 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 PEAR1Q5VY43 1037 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-209ENST00000474157 NOL10Q9BSC4 688 aaKnown RBP8.55□□□□□ -1.04
GPNMB-209ENST00000474157 HIRIP3Q9BW71 556 aaPredicted RBP8.55□□□□□ -1.04
GPNMB-209ENST00000474157 UBE2OQ9C0C9 1292 aaKnown RBP8.55□□□□□ -1.04
GPNMB-209ENST00000474157 SUV39H2Q9H5I1 410 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 SPON1Q9HCB6 807 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 MBIPQ9NS73 344 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 IGSF5Q9NSI5 407 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 SPTLC3Q9NUV7 552 aa8.55□□□□□ -1.04
GPNMB-209ENST00000474157 PTPRUQ92729 1446 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 DUOX2Q9NRD8 1548 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 VIRMAQ69YN4 1812 aaKnown RBP8.54□□□□□ -1.04
GPNMB-209ENST00000474157 INSRP06213 1382 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 SIN3BO75182 1162 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 TCF3P15923 654 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 PEX19P40855 299 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 MAGEA9P43362 315 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 GRM2Q14416 872 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 NOLC1Q14978 699 aaKnown RBP eCLIP8.54□□□□□ -1.04
GPNMB-209ENST00000474157 VPS72Q15906 364 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 NXPE4Q6UWF7 544 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 LSM14AQ8ND56 463 aaKnown RBP8.54□□□□□ -1.04
GPNMB-209ENST00000474157 TRPM4Q8TD43 1214 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 BCO2Q9BYV7 579 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 EHD4Q9H223 541 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 PRKRIP1Q9H875 184 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-209ENST00000474157 AVENQ9NQS1 362 aaPredicted RBP8.54□□□□□ -1.04
GPNMB-209ENST00000474157 DNAJB12Q9NXW2 375 aaKnown RBP8.54□□□□□ -1.04
GPNMB-209ENST00000474157 STK26Q9P289 416 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 KDM2BQ8NHM5 1336 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 MAPK8IP3Q9UPT6 1336 aa8.54□□□□□ -1.04
GPNMB-209ENST00000474157 C1orf167Q5SNV9 1468 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 RPRD2Q5VT52 1461 aaKnown RBP8.53□□□□□ -1.04
GPNMB-209ENST00000474157 ZBTB42B2RXF5 422 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 GIPC1O14908 333 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 VSIG8P0DPA2 414 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 EZH2Q15910 746 aaKnown RBP8.53□□□□□ -1.04
GPNMB-209ENST00000474157 PDCD2Q16342 344 aaPredicted RBP8.53□□□□□ -1.04
GPNMB-209ENST00000474157 KLHL40Q2TBA0 621 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 LDLRAD1Q5T700 205 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 KIAA0319Q5VV43 1072 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 HFE2Q6ZVN8 426 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 DDX46Q7L014 1031 aaKnown RBP8.53□□□□□ -1.04
GPNMB-209ENST00000474157 IQUBQ8NA54 791 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 PPM1EQ8WY54 764 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 SPACA7Q96KW9 195 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 CNTNAP3BQ96NU0 1288 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 ZKSCAN3Q9BRR0 538 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 CNTNAP3Q9BZ76 1288 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 A1CFQ9NQ94 594 aaKnown RBP8.53□□□□□ -1.04
GPNMB-209ENST00000474157 NSFL1CQ9UNZ2 370 aaKnown RBP8.53□□□□□ -1.04
GPNMB-209ENST00000474157 CEP152O94986 1710 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 DAPK1P53355 1430 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 ERBINQ96RT1 1412 aa8.53□□□□□ -1.04
GPNMB-209ENST00000474157 MYOM2P54296 1465 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 LOC102724428A0A0B4J2F2 783 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 J3QW42 95 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 MYO1CO00159 1063 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 TERTO14746 1132 aaKnown RBP8.52□□□□□ -1.05
GPNMB-209ENST00000474157 ARAFP10398 606 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 U2AF2P26368 475 aaKnown RBP eCLIP8.52□□□□□ -1.05
GPNMB-209ENST00000474157 MAP2K3P46734 347 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 SIK1P57059 783 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 RWDD2BP57060 319 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 ADCY2Q08462 1091 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 NBPF8Q3BBV2 869 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 TMEM87AQ8NBN3 555 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 EXOC6Q8TAG9 804 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 CRELD1Q96HD1 420 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 OSMRQ99650 979 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 SH3GL3Q99963 347 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
GPNMB-209ENST00000474157 FAM107BQ9H098 131 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 PANK3Q9H999 370 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 ABCF2Q9UG63 623 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 KLF15Q9UIH9 416 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 ABCC5O15440 1437 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 ADGRL3Q9HAR2 1447 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 NPHP3Q7Z494 1330 aa8.52□□□□□ -1.05
GPNMB-209ENST00000474157 ROCK2O75116 1388 aaKnown RBP8.51□□□□□ -1.05
GPNMB-209ENST00000474157 GCC2Q8IWJ2 1684 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 TMCO5BA8MYB1 307 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 SGSM2O43147 1006 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 ATP8B1O43520 1251 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 KCNQ2O43526 872 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 HTATSF1O43719 755 aaKnown RBP8.51□□□□□ -1.05
GPNMB-209ENST00000474157 PPFIA2O75334 1257 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 TRPA1O75762 1119 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 BAG4O95429 457 aaKnown RBP8.51□□□□□ -1.05
GPNMB-209ENST00000474157 CPP00450 1065 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 IVLP07476 585 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 TPM1P09493 284 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 CTSHP09668 335 aa8.51□□□□□ -1.05
GPNMB-209ENST00000474157 USP17L7P0C7H9 530 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms