RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 ZC3H15Q8WU90 426 aaKnown RBP11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 GTF3C6Q969F1 213 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 ZNF341Q9BYN7 854 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 ARHGEF10LQ9HCE6 1279 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 RBM28Q9NW13 759 aaKnown RBP11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 PLIN4Q96Q06 1357 aa11.99□□□□□ -0.49
PRPF38A-202ENST00000474048 SIPA1L1O43166 1804 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 SMIM22K7EJ46 135 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 TBC1D12O60347 775 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 GDF11O95390 407 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 TOP1P11387 765 aaKnown RBP11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 PDIA4P13667 645 aaKnown RBP11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 AKR1B1P15121 316 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 PDIA3P30101 505 aaKnown RBP11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 SHMT1P34896 483 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 ICA1Q05084 483 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 CUL4AQ13619 759 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 MIGA2Q7L4E1 593 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 SH3BP5LQ7L8J4 393 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 KRT26Q7Z3Y9 468 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 CCDC144CPQ8IYA2 1237 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 NECAB1Q8N987 351 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 LLPHQ9BRT6 129 aaKnown RBP11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 KANSL2Q9H9L4 492 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 MTMR7Q9Y216 660 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 MYH4Q9Y623 1939 aa11.98□□□□□ -0.49
PRPF38A-202ENST00000474048 ASTN2O75129 1339 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 PPP1R12BO60237 982 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 NMT2O60551 498 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 ASNSP08243 561 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 VEGFAP15692 232 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 GNAQP50148 359 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 TTLL12Q14166 644 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 SEC23AQ15436 765 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 TATDN1Q6P1N9 297 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 RAB11FIP4Q86YS3 637 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 WASF1Q92558 559 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 CEP95Q96GE4 821 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 FEZ1Q99689 392 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 TAF1DQ9H5J8 278 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 GPHNQ9NQX3 736 aaPredicted RBP11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 PICK1Q9NRD5 415 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 GINM1Q9NU53 330 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 CHMP5Q9NZZ3 219 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 TACC3Q9Y6A5 838 aa11.97□□□□□ -0.49
PRPF38A-202ENST00000474048 ATAD5Q96QE3 1844 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 LARGE1O95461 756 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 GH2P01242 217 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 GJB2P29033 226 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 EVCP57679 992 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 NUCB2P80303 420 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 SCRN1Q12765 414 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 TRIM29Q14134 588 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 METTL16Q86W50 562 aaKnown RBP11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 MYL10Q9BUA6 226 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 GOPCQ9HD26 462 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 MTMR4Q9NYA4 1195 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 CLIP2Q9UDT6 1046 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 BRPF3Q9ULD4 1205 aa11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 CIZ1Q9ULV3 898 aaPredicted RBP11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 SCAF8Q9UPN6 1271 aaKnown RBP11.96□□□□□ -0.49
PRPF38A-202ENST00000474048 GOLGB1Q14789 3259 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 PTPDC1A2A3K4 754 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 H3BQV1 296 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 PARP1P09874 1014 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 XBP1P17861 261 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 RXRAP19793 462 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 IREB2P48200 963 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 HIRAP54198 1017 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 SSRP1Q08945 709 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 IKQ13123 557 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 COL9A3Q14050 684 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 CCDC96Q2M329 555 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 NBPF12Q5TAG4 269 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 IFFO2Q5TF58 517 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 CDC37L1Q7L3B6 337 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 FANCBQ8NB91 859 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 ZNF526Q8TF50 670 aaPredicted RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 WRNIP1Q96S55 665 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 TMEM47Q9BQJ4 181 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 LZTS2Q9BRK4 669 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 DNAJC18Q9H819 358 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 AS3MTQ9HBK9 375 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 NCOA5Q9HCD5 579 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 RBM27Q9P2N5 1060 aaKnown RBP11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 ZBTB21Q9ULJ3 1066 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 CSADQ9Y600 493 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 DOCK1Q14185 1865 aa11.95□□□□□ -0.5
PRPF38A-202ENST00000474048 CTNND1O60716 968 aaKnown RBP11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 CAP2P40123 477 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 SEPT2Q15019 361 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 LRRC47Q8N1G4 583 aaKnown RBP11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 ANKS1AQ92625 1134 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 DDX11Q96FC9 970 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 MAP3K14Q99558 947 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 RRAGCQ9HB90 399 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 IL17RBQ9NRM6 502 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 NYAP2Q9P242 653 aa11.94□□□□□ -0.5
PRPF38A-202ENST00000474048 GREB1LQ9C091 1923 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms