RNA–Protein interactions for RNA: ENST00000473470.1

CNOT4-209, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 2

Gene CNOT4, Length 707 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-209ENST00000473470 CRKP46108 304 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 TNNI2P48788 182 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 IRAK1P51617 712 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 COL9A2Q14055 689 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-209ENST00000473470 LRRFIP1Q32MZ4 808 aaKnown RBP7.38□□□□□ -1.23
CNOT4-209ENST00000473470 SEZ6Q53EL9 994 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 ZNF394Q53GI3 561 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 SLITRK4Q8IW52 837 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 RNF141Q8WVD5 230 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 CCDC74BQ96LY2 380 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 ASPNQ9BXN1 380 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 EHMT1Q9H9B1 1298 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 PAK6Q9NQU5 681 aaPredicted RBP7.38□□□□□ -1.23
CNOT4-209ENST00000473470 PCDHGB7Q9Y5F8 929 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 OAS3Q9Y6K5 1087 aaKnown RBP7.38□□□□□ -1.23
CNOT4-209ENST00000473470 CAPN6Q9Y6Q1 641 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 U3KQE9 123 aa7.38□□□□□ -1.23
CNOT4-209ENST00000473470 PITPNM2Q9BZ72 1349 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 MEIS3P2A8K0S8 358 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 RAG1P15918 1043 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 RNF4P78317 190 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 PLCL1Q15111 1095 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 AOC3Q16853 763 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 KIAA1522Q9P206 1035 aaPredicted RBP7.37□□□□□ -1.23
CNOT4-209ENST00000473470 DDX41Q9UJV9 622 aaKnown RBP7.37□□□□□ -1.23
CNOT4-209ENST00000473470 KCNH3Q9ULD8 1083 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 PLAGL2Q9UPG8 496 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 CEP131Q9UPN4 1083 aa7.37□□□□□ -1.23
CNOT4-209ENST00000473470 ERCC6Q03468 1493 aa7.36□□□□□ -1.23
CNOT4-209ENST00000473470 MCM4P33991 863 aa7.36□□□□□ -1.23
CNOT4-209ENST00000473470 CCNFP41002 786 aa7.36□□□□□ -1.23
CNOT4-209ENST00000473470 NKPD1Q17RQ9 610 aa7.36□□□□□ -1.23
CNOT4-209ENST00000473470 OVOS1Q6IE37 1185 aa7.36□□□□□ -1.23
CNOT4-209ENST00000473470 TMEM40Q8WWA1 233 aa7.36□□□□□ -1.23
CNOT4-209ENST00000473470 TRIT1Q9H3H1 467 aaKnown RBP7.36□□□□□ -1.23
CNOT4-209ENST00000473470 UNCXA6NJT0 531 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 ADAMTS4O75173 837 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 FUT4P22083 530 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 RAD51AP2Q09MP3 1159 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 IKZF1Q13422 519 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 NFXL1Q6ZNB6 911 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 GK5Q6ZS86 529 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 CDH24Q86UP0 819 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 METTL16Q86W50 562 aaKnown RBP7.35□□□□□ -1.23
CNOT4-209ENST00000473470 ABI1Q8IZP0 508 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 ZNRF3Q9ULT6 936 aa7.35□□□□□ -1.23
CNOT4-209ENST00000473470 CBX7O95931 251 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 HDLBPQ00341 1268 aaKnown RBP7.34□□□□□ -1.23
CNOT4-209ENST00000473470 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 ZNF574Q6ZN55 896 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-209ENST00000473470 NLRC3Q7RTR2 1065 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 NT5DC4Q86YG4 428 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 PPP1R13LQ8WUF5 828 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 EAF1Q96JC9 268 aaPredicted RBP7.34□□□□□ -1.23
CNOT4-209ENST00000473470 TGIF2Q9GZN2 237 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.34□□□□□ -1.23
CNOT4-209ENST00000473470 CCSER2Q9H7U1 834 aa7.34□□□□□ -1.23
CNOT4-209ENST00000473470 PRR33A8MZF0 331 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 RGS13O14921 159 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 CD8BP10966 210 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 GBP1P32455 592 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 RANGAP1P46060 587 aaPredicted RBP7.33□□□□□ -1.24
CNOT4-209ENST00000473470 ARSHQ5FYA8 562 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 MCTP1Q6DN14 999 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 RIN3Q8TB24 985 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 GPRASP2Q96D09 838 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 FERD3LQ96RJ6 166 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 CNNM2Q9H8M5 875 aa7.33□□□□□ -1.24
CNOT4-209ENST00000473470 EIF4G1Q04637 1599 aaKnown RBP7.33□□□□□ -1.24
CNOT4-209ENST00000473470 SLC22A31A6NKX4 558 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 UPK3BL1B0FP48 263 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 CHURC1-FNTBB4DL54 471 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 UPK3BL2E5RIL1 263 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 H3BS24 57 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 DNAJA2O60884 412 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 TMPRSS7Q7RTY8 843 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 DTWD2Q8NBA8 298 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 RASGRP4Q8TDF6 673 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 CCDC120Q96HB5 630 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 KREMEN1Q96MU8 473 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 LMCD1Q9NZU5 365 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 ADGRE2Q9UHX3 823 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.32□□□□□ -1.24
CNOT4-209ENST00000473470 ST14Q9Y5Y6 855 aa7.32□□□□□ -1.24
CNOT4-209ENST00000473470 TCF3P15923 654 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 RBM25P49756 843 aaKnown RBP7.31□□□□□ -1.24
CNOT4-209ENST00000473470 RACK1P63244 317 aaKnown RBP7.31□□□□□ -1.24
CNOT4-209ENST00000473470 CLCQ05315 142 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 TNK2Q07912 1038 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 BNIP3Q12983 259 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 PAK2Q13177 524 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 CDKAL1Q5VV42 579 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 SLC23A3Q6PIS1 610 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 TAB3Q8N5C8 712 aaPredicted RBP7.31□□□□□ -1.24
CNOT4-209ENST00000473470 ZNF428Q96B54 188 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 SEMA3GQ9NS98 782 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 GPATCH2Q9NW75 528 aa7.31□□□□□ -1.24
CNOT4-209ENST00000473470 BIN1O00499 593 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms