RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 RANBP6O60518 1105 aaKnown RBP22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 TM4SF4P48230 202 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 TFAP4Q01664 338 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 SPP2Q13103 211 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 PPP4R3BQ5MIZ7 849 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 RNF20Q5VTR2 975 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 PRRT2Q7Z6L0 340 aaPredicted RBP22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 JMYQ8N9B5 988 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 ESR2Q92731 530 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 KRT23Q9C075 422 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 NEDD4P46934 1319 aa22.46■■□□□ 1.19
CTDSP1-207ENST00000473420 TRIM75PA6NK02 468 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 C19orf81C9J6K1 198 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 USP17L10C9JJH3 530 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 SLC27A2O14975 620 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 BACE1P56817 501 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 ICA1Q05084 483 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 SH3D19Q5HYK7 790 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 CREB3L3Q68CJ9 461 aa22.45■■□□□ 1.18
CTDSP1-207ENST00000473420 CCL15-CCL14A0A0B4J2E2 113 aa22.44■■□□□ 1.18
CTDSP1-207ENST00000473420 CCL15Q16663 113 aa22.44■■□□□ 1.18
CTDSP1-207ENST00000473420 FAM47AQ5JRC9 791 aa22.44■■□□□ 1.18
CTDSP1-207ENST00000473420 RRP12Q5JTH9 1297 aaKnown RBP22.44■■□□□ 1.18
CTDSP1-207ENST00000473420 SH2D4AQ9H788 454 aa22.44■■□□□ 1.18
CTDSP1-207ENST00000473420 ARHGEF10LQ9HCE6 1279 aa22.44■■□□□ 1.18
CTDSP1-207ENST00000473420 NYAP2Q9P242 653 aa22.44■■□□□ 1.18
CTDSP1-207ENST00000473420 E7EWF7 191 aa22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 USP14P54578 494 aa22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 MAP2K1Q02750 393 aaPredicted RBP22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 TRDNQ13061 729 aa22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 FASTKD5Q7L8L6 764 aaKnown RBP22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 PROCA1Q8NCQ7 364 aaPredicted RBP22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 BRI3BPQ8WY22 251 aa22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 KIAA1683Q9H0B3 1180 aa22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 TCP11L1Q9NUJ3 509 aa22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 CEP350Q5VT06 3117 aa22.43■■□□□ 1.18
CTDSP1-207ENST00000473420 MTMR2Q13614 643 aa22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 MOGSQ13724 837 aa22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 TSGA10IPQ3SY00 556 aa22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 SIAH1Q8IUQ4 282 aa22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 ZCCHC17Q9NP64 241 aaKnown RBP22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 MTMR4Q9NYA4 1195 aa22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 SYNPO2Q9UMS6 1093 aa22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 TMX2Q9Y320 296 aa22.42■■□□□ 1.18
CTDSP1-207ENST00000473420 B4E1Z4 1266 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 EEF2P13639 858 aaKnown RBP22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 HSPA4P34932 840 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 C8orf34Q49A92 452 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 OTUD7BQ6GQQ9 843 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 USP17L2Q6R6M4 530 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 IFNL1Q8IU54 200 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 CLEC10AQ8IUN9 316 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 NCOA7Q8NI08 942 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 ACER1Q8TDN7 264 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 KCNB2Q92953 911 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 CEP95Q96GE4 821 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 C12orf42Q96LP6 360 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 FEZ1Q99689 392 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 USP26Q9BXU7 913 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 TAF6LQ9Y6J9 622 aa22.41■■□□□ 1.18
CTDSP1-207ENST00000473420 A0A1W2PRG0 241 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 KDM4AO75164 1064 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 TTLL1O95922 423 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 ALDH1A1P00352 501 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 ZKSCAN1P17029 563 aaPredicted RBP22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 NOVP48745 357 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 HMGCS2P54868 508 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 CCDC178Q5BJE1 867 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 STOX1Q6ZVD7 989 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 RALYLQ86SE5 291 aaKnown RBP22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 ANKRD23Q86SG2 305 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 MKL1Q969V6 931 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 PTPN18Q99952 460 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 IL17RBQ9NRM6 502 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 TMOD4Q9NZQ9 345 aa22.4■■□□□ 1.18
CTDSP1-207ENST00000473420 IGF2BP3O00425 579 aaKnown RBP eCLIP22.39■■□□□ 1.17
CTDSP1-207ENST00000473420 GADL1Q6ZQY3 521 aa22.39■■□□□ 1.17
CTDSP1-207ENST00000473420 IQCA1Q86XH1 822 aa22.39■■□□□ 1.17
CTDSP1-207ENST00000473420 ZSWIM5Q9P217 1185 aa22.39■■□□□ 1.17
CTDSP1-207ENST00000473420 SLC45A1Q9Y2W3 748 aa22.39■■□□□ 1.17
CTDSP1-207ENST00000473420 BTBD19C9JJ37 291 aa22.38■■□□□ 1.17
CTDSP1-207ENST00000473420 KRT32Q14532 448 aa22.38■■□□□ 1.17
CTDSP1-207ENST00000473420 NKX2-3Q8TAU0 364 aa22.38■■□□□ 1.17
CTDSP1-207ENST00000473420 TTC14Q96N46 770 aa22.38■■□□□ 1.17
CTDSP1-207ENST00000473420 EMILIN3Q9NT22 766 aa22.38■■□□□ 1.17
CTDSP1-207ENST00000473420 CLIP2Q9UDT6 1046 aa22.38■■□□□ 1.17
CTDSP1-207ENST00000473420 AGTPBP1Q9UPW5 1226 aa22.38■■□□□ 1.17
CTDSP1-207ENST00000473420 MCCP23508 829 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 ATP2B2Q01814 1243 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 GPAT2Q6NUI2 795 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 FAM43AQ8N2R8 423 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 LPAR1Q92633 364 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 VCPKMTQ9H867 229 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 GOPCQ9HD26 462 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 WBP1LQ9NX94 342 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 SAGE1Q9NXZ1 904 aa22.37■■□□□ 1.17
CTDSP1-207ENST00000473420 CA12O43570 354 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 NMT2O60551 498 aa22.36■■□□□ 1.17
CTDSP1-207ENST00000473420 PABPC4Q13310 644 aaKnown RBP eCLIP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms