RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 SMARCA5O60264 1052 aaPredicted RBP18.48■□□□□ 0.55
VTI1A-203ENST00000472892 PEX10O60683 326 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 GUCY1A2P33402 732 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 EVX2Q03828 476 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 UBE3CQ15386 1083 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 Q3C1V9 767 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 SLFNL1Q499Z3 407 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 ACER1Q8TDN7 264 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 GTF3C2Q8WUA4 911 aaPredicted RBP18.48■□□□□ 0.55
VTI1A-203ENST00000472892 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 ARMT1Q9H993 441 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 PAK6Q9NQU5 681 aaPredicted RBP18.48■□□□□ 0.55
VTI1A-203ENST00000472892 TAOK2Q9UL54 1235 aa18.48■□□□□ 0.55
VTI1A-203ENST00000472892 DOCK3Q8IZD9 2030 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L15C9J2P7 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L13C9JLJ4 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L11C9JVI0 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L18D6R9N7 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L22D6RA61 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L17D6RBQ6 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L19D6RCP7 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L20D6RJB6 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 USP17L24Q0WX57 530 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 CATSPERGQ6ZRH7 1159 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 FEZ1Q99689 392 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 ATP8A2Q9NTI2 1148 aa18.47■□□□□ 0.55
VTI1A-203ENST00000472892 DDX60LQ5H9U9 1706 aaKnown RBP18.46■□□□□ 0.55
VTI1A-203ENST00000472892 PRKAB2O43741 272 aa18.46■□□□□ 0.55
VTI1A-203ENST00000472892 MBD4O95243 580 aa18.46■□□□□ 0.55
VTI1A-203ENST00000472892 ATXN8OSP0DMR3 200 aa18.46■□□□□ 0.55
VTI1A-203ENST00000472892 ERVK-9P63128 1117 aa18.46■□□□□ 0.55
VTI1A-203ENST00000472892 ERVK-24P63145 666 aa18.46■□□□□ 0.55
VTI1A-203ENST00000472892 SEPT2Q15019 361 aa18.46■□□□□ 0.55
VTI1A-203ENST00000472892 ZYXQ15942 572 aaKnown RBP18.46■□□□□ 0.55
VTI1A-203ENST00000472892 ECHDC1Q9NTX5 307 aa18.46■□□□□ 0.55
VTI1A-203ENST00000472892 HMGCRP04035 888 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 CHGBP05060 677 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 CYP2D6P10635 497 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 MAPK4P31152 587 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 DEFB118Q96PH6 123 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 CRISPLD2Q9H0B8 497 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 SWAP70Q9UH65 585 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 RABGAP1Q9Y3P9 1069 aa18.45■□□□□ 0.54
VTI1A-203ENST00000472892 CNMDO75829 334 aa18.44■□□□□ 0.54
VTI1A-203ENST00000472892 TFRCP02786 760 aaKnown RBP18.44■□□□□ 0.54
VTI1A-203ENST00000472892 XRCC5P13010 732 aaKnown RBP18.44■□□□□ 0.54
VTI1A-203ENST00000472892 VCAM1P19320 739 aa18.44■□□□□ 0.54
VTI1A-203ENST00000472892 HABP4Q5JVS0 413 aaKnown RBP18.44■□□□□ 0.54
VTI1A-203ENST00000472892 ZSCAN25Q6NSZ9 544 aa18.44■□□□□ 0.54
VTI1A-203ENST00000472892 LBX2Q6XYB7 198 aa18.44■□□□□ 0.54
VTI1A-203ENST00000472892 USP6NLQ92738 828 aa18.44■□□□□ 0.54
VTI1A-203ENST00000472892 NUDT12Q9BQG2 462 aa18.44■□□□□ 0.54
VTI1A-203ENST00000472892 PORCNQ9H237 461 aa18.44■□□□□ 0.54
VTI1A-203ENST00000472892 A0A1W2PRG0 241 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 H0YGN5 161 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 ABCB7O75027 752 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 FARP2O94887 1054 aaPredicted RBP18.43■□□□□ 0.54
VTI1A-203ENST00000472892 CYP2B6P20813 491 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 C12orf60Q5U649 245 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 TMEM179Q6ZVK1 233 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 SLC44A5Q8NCS7 719 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 SOCS4Q8WXH5 440 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 DPF3Q92784 378 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 DYNLL2Q96FJ2 89 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 PAGR1Q9BTK6 254 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 HTATIP2Q9BUP3 242 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.43■□□□□ 0.54
VTI1A-203ENST00000472892 RPTORQ8N122 1335 aa18.43■□□□□ 0.54
VTI1A-203ENST00000472892 NAV1Q8NEY1 1877 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 USP17L12C9JPN9 530 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 USP17L21D6R901 530 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 MPHOSPH10O00566 681 aaKnown RBP18.42■□□□□ 0.54
VTI1A-203ENST00000472892 TRIM32Q13049 653 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 MORN1Q5T089 497 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 GPR142Q7Z601 462 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 PLEKHH3Q7Z736 793 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 SIAH1Q8IUQ4 282 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 CCAR1Q8IX12 1150 aaKnown RBP18.42■□□□□ 0.54
VTI1A-203ENST00000472892 TRIB2Q92519 343 aa18.42■□□□□ 0.54
VTI1A-203ENST00000472892 PUS7LQ9H0K6 701 aaKnown RBP18.42■□□□□ 0.54
VTI1A-203ENST00000472892 MAP3K21Q5TCX8 1036 aa18.41■□□□□ 0.54
VTI1A-203ENST00000472892 TRMT44Q8IYL2 757 aaKnown RBP18.41■□□□□ 0.54
VTI1A-203ENST00000472892 CCDC17Q96LX7 622 aa18.41■□□□□ 0.54
VTI1A-203ENST00000472892 RPAP3Q9H6T3 665 aaPredicted RBP18.41■□□□□ 0.54
VTI1A-203ENST00000472892 HMX1Q9NP08 348 aaPredicted RBP18.41■□□□□ 0.54
VTI1A-203ENST00000472892 SLC4A4Q9Y6R1 1079 aa18.41■□□□□ 0.54
VTI1A-203ENST00000472892 PLXNB2O15031 1838 aa18.41■□□□□ 0.54
VTI1A-203ENST00000472892 CYP2D7A0A087X1C5 515 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 SMIM22K7EJ46 135 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 CDK8P49336 464 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 CCNA1P78396 465 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 HOXC10Q9NYD6 342 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 BTBD7Q9P203 1132 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 PCDHB15Q9Y5E8 787 aa18.4■□□□□ 0.54
VTI1A-203ENST00000472892 SPDYE16A6NNV3 312 aaPredicted RBP18.39■□□□□ 0.53
VTI1A-203ENST00000472892 AKR1B1P15121 316 aa18.39■□□□□ 0.53
VTI1A-203ENST00000472892 RGS2P41220 211 aa18.39■□□□□ 0.53
VTI1A-203ENST00000472892 COG2Q14746 738 aa18.39■□□□□ 0.53
VTI1A-203ENST00000472892 CTR9Q6PD62 1173 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms