RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 DAXXQ9UER7 740 aaPredicted RBP12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 DOCK1Q14185 1865 aa12.5□□□□□ -0.41
SMARCD3-208ENST00000472789 CXCL11O14625 94 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 TRPA1O75762 1119 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 INHBEP58166 350 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 ATP2B2Q01814 1243 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 SEPT2Q15019 361 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 RRP12Q5JTH9 1297 aaKnown RBP12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 ZNF280CQ8ND82 737 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 BRI3BPQ8WY22 251 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 MS4A4AQ96JQ5 239 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 AFG3L2Q9Y4W6 797 aa12.49□□□□□ -0.41
SMARCD3-208ENST00000472789 ROBO3Q96MS0 1386 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 ZNF213O14771 459 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 RASA1P20936 1047 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 HSPA4P34932 840 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 TM4SF4P48230 202 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 HMGCS2P54868 508 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 MTMR2Q13614 643 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 BECN1Q14457 450 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 KRT32Q14532 448 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 ZYXQ15942 572 aaKnown RBP12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 IMMTQ16891 758 aaKnown RBP12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 TMEM179Q6ZVK1 233 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 CLEC10AQ8IUN9 316 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 TBC1D2Q9BYX2 928 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 INCENPQ9NQS7 918 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 RNF186Q9NXI6 227 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 TMOD4Q9NZQ9 345 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 KCNH4Q9UQ05 1017 aa12.48□□□□□ -0.41
SMARCD3-208ENST00000472789 ZMYM6O95789 1325 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 ATAD5Q96QE3 1844 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 USP17L10C9JJH3 530 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 IGF2BP3O00425 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 RAD21O60216 631 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 RANBP6O60518 1105 aaKnown RBP12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 TSPY3P0CV98 308 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 TSPY8P0CW00 308 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 PSMA5P28066 241 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 SOX10P56693 466 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 PTH1RQ03431 593 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 ICA1Q05084 483 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 RABEP1Q15276 862 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 FASTKD5Q7L8L6 764 aaKnown RBP12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 WDR18Q9BV38 432 aa12.47□□□□□ -0.41
SMARCD3-208ENST00000472789 LAMB1P07942 1786 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 A0A0G2JLL6 359 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 TSPY2A6NKD2 308 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 BTBD19C9JJ37 291 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 ST18O60284 1047 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 TBC1D8O95759 1140 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 GUCY1A2P33402 732 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 BACE1P56817 501 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 TFAP4Q01664 338 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 TAF1CQ15572 869 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 FAM47AQ5JRC9 791 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 MFSD6Q6ZSS7 791 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 PRRT2Q7Z6L0 340 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 TBC1D10CQ8IV04 446 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 FAM43AQ8N2R8 423 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 ACER1Q8TDN7 264 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 PTPN18Q99952 460 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 RNF41Q9H4P4 317 aaPredicted RBP12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 ARHGEF10LQ9HCE6 1279 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 SAGE1Q9NXZ1 904 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
SMARCD3-208ENST00000472789 MYH8P13535 1937 aa12.46□□□□□ -0.42
SMARCD3-208ENST00000472789 BRCA2P51587 3418 aa12.46□□□□□ -0.42
SMARCD3-208ENST00000472789 TESPA1A2RU30 521 aaPredicted RBP12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 C19orf81C9J6K1 198 aa12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 PDHXO00330 501 aa12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 NECTIN1Q15223 517 aa12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 AKNAD1Q5T1N1 836 aa12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 USP17L2Q6R6M4 530 aa12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 ANKRD23Q86SG2 305 aa12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 KANSL2Q9H9L4 492 aa12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.45□□□□□ -0.42
SMARCD3-208ENST00000472789 HMGB1P09429 215 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 EEF2P13639 858 aaKnown RBP12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 USP14P54578 494 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 TSGA10IPQ3SY00 556 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 CREB3L3Q68CJ9 461 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 STAG1Q8WVM7 1258 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 NBPF3Q9H094 633 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 SH2D4AQ9H788 454 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 ZFYVE28Q9HCC9 887 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 TACC3Q9Y6A5 838 aa12.44□□□□□ -0.42
SMARCD3-208ENST00000472789 NEDD4P46934 1319 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 ORC4O43929 436 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 MCM2P49736 904 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 CRHR2Q13324 411 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 MOGSQ13724 837 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 TREML2Q5T2D2 321 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 GPAT2Q6NUI2 795 aa12.43□□□□□ -0.42
SMARCD3-208ENST00000472789 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms