RNA–Protein interactions for RNA: ENST00000472649.2

LINC02339-201, Transcript of long intergenic non-protein coding RNA 2339, humanhuman

TSL 1 (best) BASIC

Gene LINC02339, Length 752 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02339-201ENST00000472649 ITPKAP23677 461 aa7.78□□□□□ -1.16
LINC02339-201ENST00000472649 PTPN12Q05209 780 aaKnown RBP7.78□□□□□ -1.16
LINC02339-201ENST00000472649 WDR43Q15061 677 aaKnown RBP eCLIP7.78□□□□□ -1.16
LINC02339-201ENST00000472649 PHLDB3Q6NSJ2 640 aa7.78□□□□□ -1.16
LINC02339-201ENST00000472649 GATA6Q92908 595 aa7.78□□□□□ -1.16
LINC02339-201ENST00000472649 MISP3Q96FF7 219 aa7.78□□□□□ -1.16
LINC02339-201ENST00000472649 ZC3H7BQ9UGR2 993 aaKnown RBP7.78□□□□□ -1.16
LINC02339-201ENST00000472649 QRICH2Q9H0J4 1663 aa7.78□□□□□ -1.16
LINC02339-201ENST00000472649 EVC2Q86UK5 1308 aa7.78□□□□□ -1.16
LINC02339-201ENST00000472649 GADD45BO75293 160 aaPredicted RBP7.77□□□□□ -1.17
LINC02339-201ENST00000472649 PLCL1Q15111 1095 aa7.77□□□□□ -1.17
LINC02339-201ENST00000472649 OGFOD3Q6PK18 319 aa7.77□□□□□ -1.17
LINC02339-201ENST00000472649 CITED4Q96RK1 184 aa7.77□□□□□ -1.17
LINC02339-201ENST00000472649 TRIM56Q9BRZ2 755 aaKnown RBP7.77□□□□□ -1.17
LINC02339-201ENST00000472649 ATXN3LQ9H3M9 355 aa7.77□□□□□ -1.17
LINC02339-201ENST00000472649 NPHS2Q9NP85 383 aa7.77□□□□□ -1.17
LINC02339-201ENST00000472649 PAK6Q9NQU5 681 aaPredicted RBP7.77□□□□□ -1.17
LINC02339-201ENST00000472649 CTSBP07858 339 aa7.76□□□□□ -1.17
LINC02339-201ENST00000472649 RPS26P11Q5JNZ5 115 aaPredicted RBP7.76□□□□□ -1.17
LINC02339-201ENST00000472649 OGFOD2Q6N063 350 aa7.76□□□□□ -1.17
LINC02339-201ENST00000472649 DNAJC25Q9H1X3 360 aa7.76□□□□□ -1.17
LINC02339-201ENST00000472649 GSX1Q9H4S2 264 aaPredicted RBP7.76□□□□□ -1.17
LINC02339-201ENST00000472649 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
LINC02339-201ENST00000472649 KIF13AQ9H1H9 1805 aa7.75□□□□□ -1.17
LINC02339-201ENST00000472649 ITGB5P18084 799 aa7.75□□□□□ -1.17
LINC02339-201ENST00000472649 MLECQ14165 292 aa7.75□□□□□ -1.17
LINC02339-201ENST00000472649 USPL1Q5W0Q7 1092 aa7.75□□□□□ -1.17
LINC02339-201ENST00000472649 ARHGAP27Q6ZUM4 889 aa7.75□□□□□ -1.17
LINC02339-201ENST00000472649 WDR18Q9BV38 432 aa7.75□□□□□ -1.17
LINC02339-201ENST00000472649 SLC12A5Q9H2X9 1139 aa7.75□□□□□ -1.17
LINC02339-201ENST00000472649 ARHGEF40Q8TER5 1519 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 MORC1Q86VD1 984 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 POU5F2Q8N7G0 328 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 LGR6Q9HBX8 967 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 C1GALT1Q9NS00 363 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 STK26Q9P289 416 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 RCAN3Q9UKA8 241 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 NSD3Q9BZ95 1437 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 SPATA31D1Q6ZQQ2 1576 aa7.74□□□□□ -1.17
LINC02339-201ENST00000472649 ARHGEF28Q8N1W1 1705 aaKnown RBP7.74□□□□□ -1.17
LINC02339-201ENST00000472649 MYO5BQ9ULV0 1848 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 ECEL1O95672 775 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 ID3Q02535 119 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 PPP2R3AQ06190 1150 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 ORC1Q13415 861 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 PRPF40BQ6NWY9 871 aaKnown RBP7.73□□□□□ -1.17
LINC02339-201ENST00000472649 NFXL1Q6ZNB6 911 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC02339-201ENST00000472649 BCL7CQ8WUZ0 217 aaPredicted RBP7.73□□□□□ -1.17
LINC02339-201ENST00000472649 KRTAP4-11Q9BYQ6 195 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 POGKQ9P215 609 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 A2ML1A8K2U0 1454 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 TULP4Q9NRJ4 1543 aa7.73□□□□□ -1.17
LINC02339-201ENST00000472649 POLR3AO14802 1390 aaPredicted RBP7.72□□□□□ -1.17
LINC02339-201ENST00000472649 ZMYM3Q14202 1370 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 ANKRD36BQ8N2N9 1353 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 NINLQ9Y2I6 1382 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 YTHDC2Q9H6S0 1430 aaKnown RBP7.72□□□□□ -1.17
LINC02339-201ENST00000472649 RIMS2Q9UQ26 1411 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 ALKQ9UM73 1620 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 TMEM238LA0A1B0GVL6 79 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 CARNS1A5YM72 827 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 SERPINB4P48594 390 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 RRP1P56182 461 aaKnown RBP7.72□□□□□ -1.17
LINC02339-201ENST00000472649 JAG1P78504 1218 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 SEZ6L2Q6UXD5 910 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 NGEFQ8N5V2 710 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 NETO1Q8TDF5 533 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 CCDC74AQ96AQ1 378 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 PRAM1Q96QH2 718 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 FAM129BQ96TA1 746 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 ABCB6Q9NP58 842 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 CGNL1Q0VF96 1302 aa7.72□□□□□ -1.17
LINC02339-201ENST00000472649 USP32Q8NFA0 1604 aa7.71□□□□□ -1.17
LINC02339-201ENST00000472649 PTPRMP28827 1452 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 EIF1AYO14602 144 aaKnown RBP7.71□□□□□ -1.18
LINC02339-201ENST00000472649 TMPRSS2O15393 492 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 DYNC1LI2O43237 492 aaPredicted RBP7.71□□□□□ -1.18
LINC02339-201ENST00000472649 FAM87AP0C7U9 286 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 LIG1P18858 919 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 SAFB2Q14151 953 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC02339-201ENST00000472649 DTHD1Q6ZMT9 781 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 SMYD4Q8IYR2 804 aaPredicted RBP7.71□□□□□ -1.18
LINC02339-201ENST00000472649 KRT82Q9NSB4 513 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 CRIM1Q9NZV1 1036 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 PPP1R9AQ9ULJ8 1098 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 NSD2O96028 1365 aa7.71□□□□□ -1.18
LINC02339-201ENST00000472649 RNGTTO60942 597 aaKnown RBP7.7□□□□□ -1.18
LINC02339-201ENST00000472649 PDE4CQ08493 712 aa7.7□□□□□ -1.18
LINC02339-201ENST00000472649 ZNF792Q3KQV3 632 aa7.7□□□□□ -1.18
LINC02339-201ENST00000472649 CFAP53Q96M91 514 aa7.7□□□□□ -1.18
LINC02339-201ENST00000472649 DMRTB1Q96MA1 342 aa7.7□□□□□ -1.18
LINC02339-201ENST00000472649 ZC3H12CQ9C0D7 883 aaKnown RBP7.7□□□□□ -1.18
LINC02339-201ENST00000472649 SSU72Q9NP77 194 aaKnown RBP7.7□□□□□ -1.18
LINC02339-201ENST00000472649 NLRP2Q9NX02 1062 aa7.7□□□□□ -1.18
LINC02339-201ENST00000472649 TERF2IPQ9NYB0 399 aa7.7□□□□□ -1.18
LINC02339-201ENST00000472649 GPN3Q9UHW5 284 aaPredicted RBP7.7□□□□□ -1.18
LINC02339-201ENST00000472649 DLC1Q96QB1 1528 aa7.69□□□□□ -1.18
LINC02339-201ENST00000472649 C8AP07357 584 aa7.69□□□□□ -1.18
LINC02339-201ENST00000472649 GSTP1P09211 210 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms