RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 GALNT11Q8NCW6 608 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 SIN3AQ96ST3 1273 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 PBX4Q9BYU1 374 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 ADAM19Q9H013 955 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 ZFYVE28Q9HCC9 887 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 SPG7Q9UQ90 795 aa4.81□□□□□ -1.64
XRN1-209ENST00000472625 DOT1LQ8TEK3 1739 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 CHD4Q14839 1912 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 ST20-MTHFSA0A0A6YYL1 179 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 LINC01387J3KSC0 135 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 WISP1O95388 367 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 HSP90AB1P08238 724 aaKnown RBP4.8□□□□□ -1.64
XRN1-209ENST00000472625 EPHA1P21709 976 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 HYAL2Q12891 473 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 ORC1Q13415 861 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 C8orf34Q49A92 452 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 TTC39BQ5VTQ0 682 aaPredicted RBP4.8□□□□□ -1.64
XRN1-209ENST00000472625 CEP135Q66GS9 1140 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 HGSNATQ68CP4 663 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 GLYCTKQ8IVS8 523 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 TESK2Q96S53 571 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 ZKSCAN3Q9BRR0 538 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 RBCK1Q9BYM8 510 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 RBSNQ9H1K0 784 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 IVNS1ABPQ9Y6Y0 642 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 LY75O60449 1722 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 COL24A1Q17RW2 1714 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 ATP10DQ9P241 1426 aa4.8□□□□□ -1.64
XRN1-209ENST00000472625 RGPD5Q99666 1765 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 RPLP1P05386 114 aaKnown RBP4.79□□□□□ -1.64
XRN1-209ENST00000472625 H2AFB1P0C5Y9 115 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 H2AFB2P0C5Z0 115 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 DSC3Q14574 896 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 IGF2-ASQ6U949 168 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 MPRIPQ6WCQ1 1025 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 SNX29Q8TEQ0 813 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 ALKBH8Q96BT7 664 aaKnown RBP4.79□□□□□ -1.64
XRN1-209ENST00000472625 SH2B1Q9NRF2 756 aaPredicted RBP4.79□□□□□ -1.64
XRN1-209ENST00000472625 KCNK4Q9NYG8 393 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 TMOD3Q9NYL9 352 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 SOX13Q9UN79 622 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 MTMR7Q9Y216 660 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 NCAPD2Q15021 1401 aa4.79□□□□□ -1.64
XRN1-209ENST00000472625 ADCY9O60503 1353 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 CLSPNQ9HAW4 1339 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 C5P01031 1676 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 F8W735 103 aaPredicted RBP4.78□□□□□ -1.64
XRN1-209ENST00000472625 FYB1O15117 783 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 ADAM11O75078 769 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 POLR3DP05423 398 aaPredicted RBP4.78□□□□□ -1.64
XRN1-209ENST00000472625 GLB1P16278 677 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 CES1P23141 567 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 USP5P45974 858 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 RRS1Q15050 365 aaKnown RBP4.78□□□□□ -1.64
XRN1-209ENST00000472625 NBPF6Q5VWK0 638 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 TMC7Q7Z402 723 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 VN1R5Q7Z5H4 357 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 COL23A1Q86Y22 540 aaPredicted RBP4.78□□□□□ -1.64
XRN1-209ENST00000472625 IFNL2Q8IZJ0 200 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 TMEM102Q8N9M5 508 aaPredicted RBP4.78□□□□□ -1.64
XRN1-209ENST00000472625 GLIS3Q8NEA6 775 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 NLGN2Q8NFZ4 835 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 CCER1Q8TC90 406 aaPredicted RBP4.78□□□□□ -1.64
XRN1-209ENST00000472625 NXPE3Q969Y0 559 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 NBPF4Q96M43 638 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 TCF12Q99081 682 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 BHLHE41Q9C0J9 482 aaPredicted RBP4.78□□□□□ -1.64
XRN1-209ENST00000472625 AKTIPQ9H8T0 292 aa4.78□□□□□ -1.64
XRN1-209ENST00000472625 C4BP0C0L5 1744 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 SHANK3Q9BYB0 1731 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 WASHC2AQ641Q2 1341 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 IGSF1Q8N6C5 1336 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 CICQ96RK0 1608 aaPredicted RBP4.77□□□□□ -1.65
XRN1-209ENST00000472625 A0A1W2PP55 124 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 METTL12A8MUP2 240 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 PHACTR2O75167 634 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 HSPA6P17066 643 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 TGFB2P61812 414 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 EHHADHQ08426 723 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 KCNA1Q09470 495 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 AMOTQ4VCS5 1084 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 HSP90AB2PQ58FF8 381 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 ARTNQ5T4W7 220 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 NCAPG2Q86XI2 1143 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 GALNT12Q8IXK2 581 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 NLGN1Q8N2Q7 840 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 OSMRQ99650 979 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 NRSN2Q9GZP1 204 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 MRPL18Q9H0U6 180 aaKnown RBP4.77□□□□□ -1.65
XRN1-209ENST00000472625 ZFP64Q9NPA5 681 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 PKD1L3Q7Z443 1732 aa4.77□□□□□ -1.65
XRN1-209ENST00000472625 KIF20BQ96Q89 1820 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 ERVV-2B6SEH9 535 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 DDX3YO15523 660 aaKnown RBP4.76□□□□□ -1.65
XRN1-209ENST00000472625 CYP27B1O15528 508 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 YBX3P16989 372 aaKnown RBP eCLIP4.76□□□□□ -1.65
XRN1-209ENST00000472625 PDE4CQ08493 712 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 PRR23CQ6ZRP0 262 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 Q6ZS46 218 aa4.76□□□□□ -1.65
XRN1-209ENST00000472625 ACAD11Q709F0 780 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms