RNA–Protein interactions for RNA: ENST00000472318.1

SCAF4-205, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 3

Gene SCAF4, Length 796 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-205ENST00000472318 PREPP48147 710 aa9.79□□□□□ -0.84
SCAF4-205ENST00000472318 ARHGAP4P98171 946 aa9.79□□□□□ -0.84
SCAF4-205ENST00000472318 GLYCTKQ8IVS8 523 aa9.79□□□□□ -0.84
SCAF4-205ENST00000472318 RUSC1Q9BVN2 902 aa9.79□□□□□ -0.84
SCAF4-205ENST00000472318 KRTAP4-8Q9BYQ9 185 aa9.79□□□□□ -0.84
SCAF4-205ENST00000472318 SBF2Q86WG5 1849 aa9.79□□□□□ -0.84
SCAF4-205ENST00000472318 KNDC1Q76NI1 1749 aa9.79□□□□□ -0.84
SCAF4-205ENST00000472318 PAPPAQ13219 1627 aa9.78□□□□□ -0.84
SCAF4-205ENST00000472318 MEGF11A6BM72 1044 aa9.78□□□□□ -0.84
SCAF4-205ENST00000472318 TOMM70O94826 608 aa9.78□□□□□ -0.84
SCAF4-205ENST00000472318 FAM20CQ8IXL6 584 aa9.78□□□□□ -0.84
SCAF4-205ENST00000472318 NGDNQ8NEJ9 315 aaKnown RBP9.78□□□□□ -0.84
SCAF4-205ENST00000472318 ASAP3Q8TDY4 903 aa9.78□□□□□ -0.84
SCAF4-205ENST00000472318 C7orf69Q9H7B7 122 aa9.78□□□□□ -0.84
SCAF4-205ENST00000472318 COL5A2P05997 1499 aaPredicted RBP9.78□□□□□ -0.84
SCAF4-205ENST00000472318 LRRC37A3O60309 1634 aa9.78□□□□□ -0.84
SCAF4-205ENST00000472318 KIF1BO60333 1816 aa9.77□□□□□ -0.84
SCAF4-205ENST00000472318 CRB1P82279 1406 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 ESRRAP11474 423 aaPredicted RBP9.77□□□□□ -0.85
SCAF4-205ENST00000472318 CD97P48960 835 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 NFIAQ12857 509 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 GALNT12Q8IXK2 581 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 HIRIP3Q9BW71 556 aaPredicted RBP9.77□□□□□ -0.85
SCAF4-205ENST00000472318 BRPF3Q9ULD4 1205 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 HIF3AQ9Y2N7 669 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 PPLO60437 1756 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 PNPLA7Q6ZV29 1317 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 LMO7Q8WWI1 1683 aa9.77□□□□□ -0.85
SCAF4-205ENST00000472318 CPDO75976 1380 aa9.76□□□□□ -0.85
SCAF4-205ENST00000472318 METTL12A8MUP2 240 aa9.76□□□□□ -0.85
SCAF4-205ENST00000472318 FDX2Q6P4F2 183 aa9.76□□□□□ -0.85
SCAF4-205ENST00000472318 LOC100289279A0A1B0GTE1 492 aa9.75□□□□□ -0.85
SCAF4-205ENST00000472318 SART1O43290 800 aaKnown RBP9.75□□□□□ -0.85
SCAF4-205ENST00000472318 POLR3DP05423 398 aaPredicted RBP9.75□□□□□ -0.85
SCAF4-205ENST00000472318 ZDHHC13Q8IUH4 622 aa9.75□□□□□ -0.85
SCAF4-205ENST00000472318 CCNJLQ8IV13 435 aa9.75□□□□□ -0.85
SCAF4-205ENST00000472318 TRIM42Q8IWZ5 723 aa9.75□□□□□ -0.85
SCAF4-205ENST00000472318 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
SCAF4-205ENST00000472318 FAM129BQ96TA1 746 aa9.75□□□□□ -0.85
SCAF4-205ENST00000472318 TMPRSS13Q9BYE2 586 aa9.75□□□□□ -0.85
SCAF4-205ENST00000472318 PIK3C2GO75747 1445 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 A0A1W2PP55 124 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 HMX2A2RU54 273 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 NDUFB5O43674 189 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 HSPA1AP0DMV8 641 aaKnown RBP9.74□□□□□ -0.85
SCAF4-205ENST00000472318 HSPA1BP0DMV9 641 aaKnown RBP9.74□□□□□ -0.85
SCAF4-205ENST00000472318 BMP3P12645 472 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 RGL3Q3MIN7 710 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 RNF43Q68DV7 783 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 CLEC10AQ8IUN9 316 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 ACSBG1Q96GR2 724 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 TCF12Q99081 682 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 DBNDD2Q9BQY9 259 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 USP26Q9BXU7 913 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 NRSN2Q9GZP1 204 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 SUGCTQ9HAC7 445 aa9.74□□□□□ -0.85
SCAF4-205ENST00000472318 TIAF1O95411 115 aa9.73□□□□□ -0.85
SCAF4-205ENST00000472318 SMG8Q8ND04 991 aaKnown RBP9.73□□□□□ -0.85
SCAF4-205ENST00000472318 FAM83CQ9BQN1 747 aa9.73□□□□□ -0.85
SCAF4-205ENST00000472318 NMRK2Q9NPI5 230 aa9.73□□□□□ -0.85
SCAF4-205ENST00000472318 POGKQ9P215 609 aa9.73□□□□□ -0.85
SCAF4-205ENST00000472318 WDR90Q96KV7 1748 aa9.73□□□□□ -0.85
SCAF4-205ENST00000472318 TNS2Q63HR2 1409 aa9.73□□□□□ -0.85
SCAF4-205ENST00000472318 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
SCAF4-205ENST00000472318 EIF4EBP3O60516 100 aaPredicted RBP9.72□□□□□ -0.85
SCAF4-205ENST00000472318 DLGAP3O95886 979 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 TGFB1P01137 390 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 ITGAEP38570 1179 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 USPL1Q5W0Q7 1092 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 TOM1L2Q6ZVM7 507 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 PSMG3-AS1Q96PY0 264 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 C14orf93Q9H972 538 aaKnown RBP9.72□□□□□ -0.85
SCAF4-205ENST00000472318 LIN7BQ9HAP6 207 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 PCMTD2Q9NV79 361 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 COL24A1Q17RW2 1714 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 USP19O94966 1318 aa9.72□□□□□ -0.85
SCAF4-205ENST00000472318 TOPAZ1Q8N9V7 1692 aa9.71□□□□□ -0.85
SCAF4-205ENST00000472318 A0A096LPE4 126 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 A0A1W2PPZ6 126 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 IGHA2P01877 340 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 GCP02774 474 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 NEFLP07196 543 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 SSTR4P31391 388 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 GRIA4P48058 902 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 BEND4Q6ZU67 534 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 CITED4Q96RK1 184 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 CHMP4AQ9BY43 222 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 CLEC4MQ9H2X3 399 aaPredicted RBP9.71□□□□□ -0.86
SCAF4-205ENST00000472318 TULP4Q9NRJ4 1543 aa9.71□□□□□ -0.86
SCAF4-205ENST00000472318 PATL2C9JE40 543 aaKnown RBP9.7□□□□□ -0.86
SCAF4-205ENST00000472318 GAS2O43903 313 aaKnown RBP9.7□□□□□ -0.86
SCAF4-205ENST00000472318 PCDH1Q08174 1060 aa9.7□□□□□ -0.86
SCAF4-205ENST00000472318 PDE4CQ08493 712 aa9.7□□□□□ -0.86
SCAF4-205ENST00000472318 ORC1Q13415 861 aa9.7□□□□□ -0.86
SCAF4-205ENST00000472318 KIAA0319Q5VV43 1072 aa9.7□□□□□ -0.86
SCAF4-205ENST00000472318 KCNF1Q9H3M0 494 aa9.7□□□□□ -0.86
SCAF4-205ENST00000472318 CYP4F12Q9HCS2 524 aa9.7□□□□□ -0.86
SCAF4-205ENST00000472318 ANKRD30BQ9BXX2 1392 aa9.7□□□□□ -0.86
SCAF4-205ENST00000472318 EXOC5O00471 708 aa9.69□□□□□ -0.86
SCAF4-205ENST00000472318 GSTM4Q03013 218 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms