RNA–Protein interactions for RNA: ENST00000472221.5

SEC61A2-212, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

TSL 2

Gene SEC61A2, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-212ENST00000472221 USP17L22D6RA61 530 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 USP17L17D6RBQ6 530 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 USP17L19D6RCP7 530 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 USP17L20D6RJB6 530 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 CNMDO75829 334 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 USP14P54578 494 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 USP17L24Q0WX57 530 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 PDE3AQ14432 1141 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 TTF1Q15361 905 aaPredicted RBP20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 ABCB5Q2M3G0 1257 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 PLEKHH3Q7Z736 793 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 TRMT44Q8IYL2 757 aaKnown RBP20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 ACER1Q8TDN7 264 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 FEZ1Q99689 392 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 KIAA1683Q9H0B3 1180 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 LAMA3Q16787 3333 aa20.3■□□□□ 0.84
SEC61A2-212ENST00000472221 PDE6AP16499 860 aa20.29■□□□□ 0.84
SEC61A2-212ENST00000472221 SLC9C2Q5TAH2 1124 aa20.29■□□□□ 0.84
SEC61A2-212ENST00000472221 CATSPERGQ6ZRH7 1159 aa20.29■□□□□ 0.84
SEC61A2-212ENST00000472221 CCAR1Q8IX12 1150 aaKnown RBP20.29■□□□□ 0.84
SEC61A2-212ENST00000472221 NBPF3Q9H094 633 aa20.29■□□□□ 0.84
SEC61A2-212ENST00000472221 RABGAP1Q9Y3P9 1069 aa20.29■□□□□ 0.84
SEC61A2-212ENST00000472221 A0A1W2PPC1 479 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 ZKSCAN1P17029 563 aaPredicted RBP20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 VCAM1P19320 739 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 GUCY1A2P33402 732 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 RGS2P41220 211 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 GABPAQ06546 454 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 CACNB2Q08289 660 aaPredicted RBP20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 CCL14Q16627 93 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 DIEXFQ68CQ4 756 aaKnown RBP20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 CLASRPQ8N2M8 674 aaKnown RBP20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 KIF1BPQ96EK5 621 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 CABP5Q9NP86 173 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 NAV1Q8NEY1 1877 aa20.28■□□□□ 0.84
SEC61A2-212ENST00000472221 TCRBV5S4A2TA0A5A2 114 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 POLR3DP05423 398 aaPredicted RBP20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 MS4A1P11836 297 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 EVX2Q03828 476 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 LBX2Q6XYB7 198 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 SIRT2Q8IXJ6 389 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 RPAP2Q8IXW5 612 aaPredicted RBP20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 APBA2Q99767 749 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 CRNKL1Q9BZJ0 848 aaKnown RBP20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 C11orf49Q9H6J7 331 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 STAP2Q9UGK3 403 aa20.27■□□□□ 0.84
SEC61A2-212ENST00000472221 ZNF532Q9HCE3 1301 aa20.27■□□□□ 0.83
SEC61A2-212ENST00000472221 APBB1O00213 710 aa20.26■□□□□ 0.83
SEC61A2-212ENST00000472221 CCNA1P78396 465 aa20.26■□□□□ 0.83
SEC61A2-212ENST00000472221 C7orf61Q8IZ16 206 aa20.26■□□□□ 0.83
SEC61A2-212ENST00000472221 ZBTB40Q9NUA8 1239 aa20.26■□□□□ 0.83
SEC61A2-212ENST00000472221 MCM9Q9NXL9 1143 aa20.26■□□□□ 0.83
SEC61A2-212ENST00000472221 GOLIM4O00461 696 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 CCND3P30281 292 aaPredicted RBP20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 MAP2K5Q13163 448 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 SEPT2Q15019 361 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 LHX8Q68G74 356 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 DNAJC2Q99543 621 aaKnown RBP20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 GDF15Q99988 308 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 BTBD7Q9P203 1132 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 DDX19BQ9UMR2 479 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 PFASO15067 1338 aa20.25■□□□□ 0.83
SEC61A2-212ENST00000472221 SPDYE16A6NNV3 312 aaPredicted RBP20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 HMMRO75330 724 aa20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 IFIT2P09913 472 aaKnown RBP20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 LCORLQ8N3X6 602 aa20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 SDR42E1Q8WUS8 393 aa20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 EDC3Q96F86 508 aaKnown RBP20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 RPAP3Q9H6T3 665 aaPredicted RBP20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 DCP1AQ9NPI6 582 aaPredicted RBP20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 COG6Q9Y2V7 657 aa20.24■□□□□ 0.83
SEC61A2-212ENST00000472221 A0A1W2PRG0 241 aa20.23■□□□□ 0.83
SEC61A2-212ENST00000472221 SOX1O00570 391 aaPredicted RBP20.23■□□□□ 0.83
SEC61A2-212ENST00000472221 GLRX3O76003 335 aaKnown RBP20.23■□□□□ 0.83
SEC61A2-212ENST00000472221 COL6A1P12109 1028 aa20.23■□□□□ 0.83
SEC61A2-212ENST00000472221 PTPREP23469 700 aa20.23■□□□□ 0.83
SEC61A2-212ENST00000472221 FLRT1Q9NZU1 646 aa20.23■□□□□ 0.83
SEC61A2-212ENST00000472221 ZMYND8Q9ULU4 1186 aaPredicted RBP20.23■□□□□ 0.83
SEC61A2-212ENST00000472221 SLC15A5A6NIM6 579 aa20.22■□□□□ 0.83
SEC61A2-212ENST00000472221 RAB11FIP3O75154 756 aa20.22■□□□□ 0.83
SEC61A2-212ENST00000472221 BMP8BP34820 402 aa20.22■□□□□ 0.83
SEC61A2-212ENST00000472221 MPHOSPH10O00566 681 aaKnown RBP20.21■□□□□ 0.83
SEC61A2-212ENST00000472221 HOXC6P09630 235 aa20.21■□□□□ 0.83
SEC61A2-212ENST00000472221 CYP2D6P10635 497 aa20.21■□□□□ 0.83
SEC61A2-212ENST00000472221 GRB14Q14449 540 aa20.21■□□□□ 0.83
SEC61A2-212ENST00000472221 WDR78Q5VTH9 848 aa20.21■□□□□ 0.83
SEC61A2-212ENST00000472221 ARMT1Q9H993 441 aa20.21■□□□□ 0.83
SEC61A2-212ENST00000472221 PAG1Q9NWQ8 432 aa20.21■□□□□ 0.83
SEC61A2-212ENST00000472221 SYN1P17600 705 aa20.2■□□□□ 0.82
SEC61A2-212ENST00000472221 ADD2P35612 726 aa20.2■□□□□ 0.82
SEC61A2-212ENST00000472221 SLFNL1Q499Z3 407 aa20.2■□□□□ 0.82
SEC61A2-212ENST00000472221 SLC44A5Q8NCS7 719 aa20.2■□□□□ 0.82
SEC61A2-212ENST00000472221 BCL11AQ9H165 835 aa20.2■□□□□ 0.82
SEC61A2-212ENST00000472221 BOLA2Q9H3K6 86 aa20.2■□□□□ 0.82
SEC61A2-212ENST00000472221 SWAP70Q9UH65 585 aa20.2■□□□□ 0.82
SEC61A2-212ENST00000472221 PRKAB2O43741 272 aa20.19■□□□□ 0.82
SEC61A2-212ENST00000472221 ATP5JP18859 108 aa20.19■□□□□ 0.82
SEC61A2-212ENST00000472221 COG2Q14746 738 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms