RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 JAG1P78504 1218 aa22.77■■□□□ 1.24
CHMP2B-204ENST00000472024 TROAPQ12815 778 aa22.77■■□□□ 1.24
CHMP2B-204ENST00000472024 PPP2R5BQ15173 497 aa22.77■■□□□ 1.24
CHMP2B-204ENST00000472024 CDC37L1Q7L3B6 337 aa22.77■■□□□ 1.24
CHMP2B-204ENST00000472024 LDHDQ86WU2 507 aa22.77■■□□□ 1.24
CHMP2B-204ENST00000472024 RRAGCQ9HB90 399 aa22.77■■□□□ 1.24
CHMP2B-204ENST00000472024 NYAP2Q9P242 653 aa22.77■■□□□ 1.24
CHMP2B-204ENST00000472024 CCDC69A6NI79 296 aa22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 ADM5C9JUS6 153 aa22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 CTNND1O60716 968 aaKnown RBP22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 TOP1P11387 765 aaKnown RBP22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 MIGA2Q7L4E1 593 aa22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 ZNF654Q8IZM8 581 aa22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 TMEM47Q9BQJ4 181 aa22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 LARP6Q9BRS8 491 aaKnown RBP22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 ZBTB21Q9ULJ3 1066 aa22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 SLC12A7Q9Y666 1083 aa22.76■■□□□ 1.23
CHMP2B-204ENST00000472024 ZBTB43O43298 467 aa22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 TTLL1O95922 423 aa22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 CALM1P0DP23 149 aa22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 CALM2P0DP24 149 aa22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 CALM3P0DP25 149 aa22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 EAPPQ56P03 285 aaPredicted RBP22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 NOL9Q5SY16 702 aaKnown RBP22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 NOL8Q76FK4 1167 aaKnown RBP22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 SLKQ9H2G2 1235 aaPredicted RBP22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 CABP5Q9NP86 173 aa22.75■■□□□ 1.23
CHMP2B-204ENST00000472024 GOLGA8BA8MQT2 603 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 GH2P01242 217 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 ASNSP08243 561 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 SCRN1Q12765 414 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 MAP3K11Q16584 847 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 NFXL1Q6ZNB6 911 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 CATIPQ7Z7H3 387 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 USP48Q86UV5 1035 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 SIAH1Q8IUQ4 282 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 KLRG1Q96E93 195 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 CDCA5Q96FF9 252 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 LLPHQ9BRT6 129 aaKnown RBP22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 NMRK2Q9NPI5 230 aa22.74■■□□□ 1.23
CHMP2B-204ENST00000472024 GDF11O95390 407 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 POTEIP0CG38 1075 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 POTEJP0CG39 1038 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 SEPT2Q15019 361 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 SHROOM1Q2M3G4 852 aaPredicted RBP22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 SYNE3Q6ZMZ3 975 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 PNMA1Q8ND90 353 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 KAT14Q9H8E8 782 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 FAM217BQ9NTX9 383 aaPredicted RBP22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 DOCK1Q14185 1865 aa22.73■■□□□ 1.23
CHMP2B-204ENST00000472024 MPHOSPH10O00566 681 aaKnown RBP22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 SNHG28P0DPA3 235 aa22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 DDIT3P35638 169 aa22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 ICA1Q05084 483 aa22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 PRAMEF18Q5VWM3 479 aa22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 GLIS2Q9BZE0 524 aaPredicted RBP22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 STX8Q9UNK0 236 aa22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 ATAD5Q96QE3 1844 aa22.72■■□□□ 1.23
CHMP2B-204ENST00000472024 DHX16O60231 1041 aaKnown RBP22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 USP2O75604 605 aaPredicted RBP22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 SLC4A3P48751 1232 aa22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 METAP2P50579 478 aaKnown RBP eCLIP22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 CCDC83Q8IWF9 413 aa22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 NECAB1Q8N987 351 aa22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 FANCBQ8NB91 859 aa22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 SMARCC2Q8TAQ2 1214 aa22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.71■■□□□ 1.23
CHMP2B-204ENST00000472024 UNCXA6NJT0 531 aa22.7■■□□□ 1.22
CHMP2B-204ENST00000472024 EEF2P13639 858 aaKnown RBP22.7■■□□□ 1.22
CHMP2B-204ENST00000472024 NTRK3Q16288 839 aa22.7■■□□□ 1.22
CHMP2B-204ENST00000472024 MICU3Q86XE3 530 aa22.7■■□□□ 1.22
CHMP2B-204ENST00000472024 SCYL3Q8IZE3 742 aa22.7■■□□□ 1.22
CHMP2B-204ENST00000472024 RBM28Q9NW13 759 aaKnown RBP22.7■■□□□ 1.22
CHMP2B-204ENST00000472024 DAXXQ9UER7 740 aaPredicted RBP22.7■■□□□ 1.22
CHMP2B-204ENST00000472024 CCDC196A0A1B0GTZ2 297 aa22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 GOLGA8AA7E2F4 631 aa22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 CTDNEP1O95476 244 aa22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 GRM4Q14833 912 aa22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 NSUN7Q8NE18 718 aaKnown RBP22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 GMCL1P1Q8NEA9 526 aa22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 CWC22Q9HCG8 908 aaKnown RBP22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 CLIP2Q9UDT6 1046 aa22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 MYH4Q9Y623 1939 aa22.69■■□□□ 1.22
CHMP2B-204ENST00000472024 PPP1R12BO60237 982 aaPredicted RBP22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 CDC27P30260 824 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 INPP5BP32019 993 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 NF2P35240 595 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 STK3Q13188 491 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 RTN1Q16799 776 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 MAP1SQ66K74 1059 aaPredicted RBP22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 CLEC10AQ8IUN9 316 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 ZNF784Q8NCA9 323 aaPredicted RBP22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 WRNIP1Q96S55 665 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 MYL10Q9BUA6 226 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 WDR18Q9BV38 432 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 CLEC11AQ9Y240 323 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 TMX2Q9Y320 296 aa22.68■■□□□ 1.22
CHMP2B-204ENST00000472024 OTOFQ9HC10 1997 aa22.67■■□□□ 1.22
CHMP2B-204ENST00000472024 PALM3A6NDB9 673 aaPredicted RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms