RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 USP17L24Q0WX57 530 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 GRB14Q14449 540 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 GJC2Q5T442 439 aaPredicted RBP23.4■■□□□ 1.34
SORT1-203ENST00000471996 ARRDC4Q8NCT1 418 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 NPLOC4Q8TAT6 608 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 BADQ92934 168 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 PRDM5Q9NQX1 630 aaPredicted RBP23.4■■□□□ 1.34
SORT1-203ENST00000471996 SMC4Q9NTJ3 1288 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 PALD1Q9ULE6 856 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 FRMPD3Q5JV73 1810 aa23.4■■□□□ 1.34
SORT1-203ENST00000471996 LTBP2Q14767 1821 aa23.39■■□□□ 1.33
SORT1-203ENST00000471996 E9PSI1 815 aa23.39■■□□□ 1.33
SORT1-203ENST00000471996 IGHA2P01877 340 aa23.39■■□□□ 1.33
SORT1-203ENST00000471996 MCAMP43121 646 aa23.39■■□□□ 1.33
SORT1-203ENST00000471996 NAA16Q6N069 864 aaPredicted RBP23.39■■□□□ 1.33
SORT1-203ENST00000471996 MEIS3Q99687 375 aa23.39■■□□□ 1.33
SORT1-203ENST00000471996 IVNS1ABPQ9Y6Y0 642 aa23.39■■□□□ 1.33
SORT1-203ENST00000471996 SRGAP3O43295 1099 aa23.38■■□□□ 1.33
SORT1-203ENST00000471996 CYBAP13498 195 aa23.38■■□□□ 1.33
SORT1-203ENST00000471996 CATSPERGQ6ZRH7 1159 aa23.38■■□□□ 1.33
SORT1-203ENST00000471996 MUC3AQ02505 3323 aa23.38■■□□□ 1.33
SORT1-203ENST00000471996 GH2P01242 217 aa23.37■■□□□ 1.33
SORT1-203ENST00000471996 SNX17Q15036 470 aa23.37■■□□□ 1.33
SORT1-203ENST00000471996 LBX2Q6XYB7 198 aa23.37■■□□□ 1.33
SORT1-203ENST00000471996 TMEM265A0A087WTH1 108 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 KBTBD13C9JR72 458 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 ANP32CO43423 234 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 HLA-DOAP06340 250 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 UQCRFS1P1P0C7P4 283 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 ZYXQ15942 572 aaKnown RBP23.36■■□□□ 1.33
SORT1-203ENST00000471996 TRIM60Q495X7 471 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 FEZ1Q99689 392 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 PDLIM7Q9NR12 457 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 BTBD7Q9P203 1132 aa23.36■■□□□ 1.33
SORT1-203ENST00000471996 TTC28Q96AY4 2481 aa23.35■■□□□ 1.33
SORT1-203ENST00000471996 COL9A1P20849 921 aa23.35■■□□□ 1.33
SORT1-203ENST00000471996 USP14P54578 494 aa23.35■■□□□ 1.33
SORT1-203ENST00000471996 MTX1Q13505 466 aa23.35■■□□□ 1.33
SORT1-203ENST00000471996 ATF7IPQ6VMQ6 1270 aa23.35■■□□□ 1.33
SORT1-203ENST00000471996 ADGRA1Q86SQ6 560 aa23.35■■□□□ 1.33
SORT1-203ENST00000471996 SAP30BPQ9UHR5 308 aaKnown RBP23.35■■□□□ 1.33
SORT1-203ENST00000471996 NOB1Q9ULX3 412 aaKnown RBP23.35■■□□□ 1.33
SORT1-203ENST00000471996 TRIM43BA6NCK2 446 aa23.34■■□□□ 1.33
SORT1-203ENST00000471996 OLFML2BQ68BL8 750 aa23.34■■□□□ 1.33
SORT1-203ENST00000471996 SH3RF1Q7Z6J0 888 aa23.34■■□□□ 1.33
SORT1-203ENST00000471996 TRIM43Q96BQ3 446 aaPredicted RBP23.34■■□□□ 1.33
SORT1-203ENST00000471996 VCAM1P19320 739 aa23.33■■□□□ 1.33
SORT1-203ENST00000471996 SLFN5Q08AF3 891 aa23.33■■□□□ 1.33
SORT1-203ENST00000471996 TJAP1Q5JTD0 557 aa23.33■■□□□ 1.33
SORT1-203ENST00000471996 C1orf53Q5VUE5 145 aa23.33■■□□□ 1.33
SORT1-203ENST00000471996 ANO1Q5XXA6 986 aa23.33■■□□□ 1.33
SORT1-203ENST00000471996 DPP9Q86TI2 863 aa23.33■■□□□ 1.33
SORT1-203ENST00000471996 API5Q9BZZ5 524 aaKnown RBP23.33■■□□□ 1.33
SORT1-203ENST00000471996 KIAA1683Q9H0B3 1180 aa23.33■■□□□ 1.33
SORT1-203ENST00000471996 SPDYE16A6NNV3 312 aaPredicted RBP23.32■■□□□ 1.32
SORT1-203ENST00000471996 SEPT4O43236 478 aa23.32■■□□□ 1.32
SORT1-203ENST00000471996 TATDN1Q6P1N9 297 aa23.32■■□□□ 1.32
SORT1-203ENST00000471996 SNRKQ9NRH2 765 aa23.32■■□□□ 1.32
SORT1-203ENST00000471996 TNFRSF10AO00220 468 aa23.31■■□□□ 1.32
SORT1-203ENST00000471996 ADCYAP1R1P41586 468 aa23.31■■□□□ 1.32
SORT1-203ENST00000471996 RLFQ13129 1914 aa23.31■■□□□ 1.32
SORT1-203ENST00000471996 STRNO43815 780 aa23.3■■□□□ 1.32
SORT1-203ENST00000471996 MYCNP04198 464 aaPredicted RBP23.3■■□□□ 1.32
SORT1-203ENST00000471996 GNAI3P08754 354 aa23.3■■□□□ 1.32
SORT1-203ENST00000471996 ADORA2AP29274 412 aa23.3■■□□□ 1.32
SORT1-203ENST00000471996 RAB3GAP1Q15042 981 aa23.3■■□□□ 1.32
SORT1-203ENST00000471996 ACER1Q8TDN7 264 aa23.3■■□□□ 1.32
SORT1-203ENST00000471996 RNPC3Q96LT9 517 aaKnown RBP23.3■■□□□ 1.32
SORT1-203ENST00000471996 TACC3Q9Y6A5 838 aa23.3■■□□□ 1.32
SORT1-203ENST00000471996 ITGB8P26012 769 aa23.29■■□□□ 1.32
SORT1-203ENST00000471996 TLE2Q04725 743 aa23.29■■□□□ 1.32
SORT1-203ENST00000471996 GRIN2CQ14957 1233 aa23.29■■□□□ 1.32
SORT1-203ENST00000471996 LRRC41Q15345 812 aa23.29■■□□□ 1.32
SORT1-203ENST00000471996 USP38Q8NB14 1042 aa23.29■■□□□ 1.32
SORT1-203ENST00000471996 FERMT2Q96AC1 680 aa23.29■■□□□ 1.32
SORT1-203ENST00000471996 RPAP3Q9H6T3 665 aaPredicted RBP23.29■■□□□ 1.32
SORT1-203ENST00000471996 IGSF3O75054 1194 aa23.28■■□□□ 1.32
SORT1-203ENST00000471996 CYP2E1P05181 493 aaPredicted RBP23.28■■□□□ 1.32
SORT1-203ENST00000471996 EPHB4P54760 987 aa23.28■■□□□ 1.32
SORT1-203ENST00000471996 DYNLL1P63167 89 aaKnown RBP23.28■■□□□ 1.32
SORT1-203ENST00000471996 G3BP1Q13283 466 aaKnown RBP eCLIP23.28■■□□□ 1.32
SORT1-203ENST00000471996 MOV10L1Q9BXT6 1211 aaKnown RBP23.28■■□□□ 1.32
SORT1-203ENST00000471996 COBLO75128 1261 aa23.27■■□□□ 1.32
SORT1-203ENST00000471996 CERKLQ49MI3 558 aaPredicted RBP23.27■■□□□ 1.32
SORT1-203ENST00000471996 TTC39AQ5SRH9 613 aa23.27■■□□□ 1.32
SORT1-203ENST00000471996 EHD4Q9H223 541 aa23.27■■□□□ 1.32
SORT1-203ENST00000471996 SERPINB13Q9UIV8 391 aa23.27■■□□□ 1.32
SORT1-203ENST00000471996 ABCB5Q2M3G0 1257 aa23.26■■□□□ 1.31
SORT1-203ENST00000471996 PRAMEF19Q5SWL8 479 aa23.26■■□□□ 1.31
SORT1-203ENST00000471996 SHCBP1Q8NEM2 672 aa23.26■■□□□ 1.31
SORT1-203ENST00000471996 CLTBP09497 229 aa23.25■■□□□ 1.31
SORT1-203ENST00000471996 FAM47AQ5JRC9 791 aa23.25■■□□□ 1.31
SORT1-203ENST00000471996 SPATC1LQ9H0A9 340 aa23.25■■□□□ 1.31
SORT1-203ENST00000471996 CABP5Q9NP86 173 aa23.25■■□□□ 1.31
SORT1-203ENST00000471996 SLC5A4Q9NY91 659 aa23.25■■□□□ 1.31
SORT1-203ENST00000471996 HOXC10Q9NYD6 342 aa23.25■■□□□ 1.31
SORT1-203ENST00000471996 PHF24Q9UPV7 400 aa23.25■■□□□ 1.31
SORT1-203ENST00000471996 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.24■■□□□ 1.31
SORT1-203ENST00000471996 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.24■■□□□ 1.31
SORT1-203ENST00000471996 KIAA0355O15063 1070 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms