RNA–Protein interactions for RNA: ENST00000471751.5

SNX4-203, Transcript of sorting nexin 4, humanhuman

TSL 2

Gene SNX4, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-203ENST00000471751 MIGA2Q7L4E1 593 aa22.26■■□□□ 1.15
SNX4-203ENST00000471751 ENAHQ8N8S7 591 aaPredicted RBP22.26■■□□□ 1.15
SNX4-203ENST00000471751 BRF1Q92994 677 aa22.26■■□□□ 1.15
SNX4-203ENST00000471751 CDCA5Q96FF9 252 aa22.26■■□□□ 1.15
SNX4-203ENST00000471751 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.26■■□□□ 1.15
SNX4-203ENST00000471751 CCDC69A6NI79 296 aa22.25■■□□□ 1.15
SNX4-203ENST00000471751 K7ELQ4 463 aaPredicted RBP22.25■■□□□ 1.15
SNX4-203ENST00000471751 TOP1P11387 765 aaKnown RBP22.25■■□□□ 1.15
SNX4-203ENST00000471751 IREB2P48200 963 aaKnown RBP22.25■■□□□ 1.15
SNX4-203ENST00000471751 CHST3Q7LGC8 479 aa22.25■■□□□ 1.15
SNX4-203ENST00000471751 ADM5C9JUS6 153 aa22.24■■□□□ 1.15
SNX4-203ENST00000471751 USP2O75604 605 aaPredicted RBP22.24■■□□□ 1.15
SNX4-203ENST00000471751 RCSD1Q6JBY9 416 aa22.24■■□□□ 1.15
SNX4-203ENST00000471751 CDAN1Q8IWY9 1227 aa22.24■■□□□ 1.15
SNX4-203ENST00000471751 DHX16O60231 1041 aaKnown RBP22.23■■□□□ 1.15
SNX4-203ENST00000471751 DDAH1O94760 285 aa22.23■■□□□ 1.15
SNX4-203ENST00000471751 MAP3K9P80192 1104 aa22.23■■□□□ 1.15
SNX4-203ENST00000471751 COL9A3Q14050 684 aaPredicted RBP22.23■■□□□ 1.15
SNX4-203ENST00000471751 ARMC9Q7Z3E5 817 aa22.23■■□□□ 1.15
SNX4-203ENST00000471751 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.23■■□□□ 1.15
SNX4-203ENST00000471751 NKX2-3Q8TAU0 364 aa22.23■■□□□ 1.15
SNX4-203ENST00000471751 CEP95Q96GE4 821 aa22.23■■□□□ 1.15
SNX4-203ENST00000471751 GLIS2Q9BZE0 524 aaPredicted RBP22.23■■□□□ 1.15
SNX4-203ENST00000471751 ZBTB21Q9ULJ3 1066 aa22.23■■□□□ 1.15
SNX4-203ENST00000471751 SLC12A7Q9Y666 1083 aa22.23■■□□□ 1.15
SNX4-203ENST00000471751 CCDC196A0A1B0GTZ2 297 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 MPHOSPH10O00566 681 aaKnown RBP22.22■■□□□ 1.15
SNX4-203ENST00000471751 GH2P01242 217 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 MAP1SQ66K74 1059 aaPredicted RBP22.22■■□□□ 1.15
SNX4-203ENST00000471751 NFXL1Q6ZNB6 911 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 CATIPQ7Z7H3 387 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 SCYL3Q8IZE3 742 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 TCEANC2Q96MN5 208 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 SH2D4AQ9H788 454 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 KAT14Q9H8E8 782 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 SCAF8Q9UPN6 1271 aaKnown RBP22.22■■□□□ 1.15
SNX4-203ENST00000471751 NID2Q14112 1375 aa22.22■■□□□ 1.15
SNX4-203ENST00000471751 FAM196BA6NMK8 535 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 APOA5Q6Q788 366 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 ANKRD13AQ8IZ07 590 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 INTS4Q96HW7 963 aaKnown RBP22.21■■□□□ 1.15
SNX4-203ENST00000471751 ZKSCAN3Q9BRR0 538 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 LRRC2Q9BYS8 371 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 ARHGEF10LQ9HCE6 1279 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 TPCN1Q9ULQ1 816 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 STX8Q9UNK0 236 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 SSC5DA1L4H1 1573 aa22.21■■□□□ 1.15
SNX4-203ENST00000471751 PFKFB2O60825 505 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 ITGBL1O95965 494 aaPredicted RBP22.2■■□□□ 1.14
SNX4-203ENST00000471751 PDIA3P30101 505 aaKnown RBP22.2■■□□□ 1.14
SNX4-203ENST00000471751 GUCY1A2P33402 732 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 PRAMEF18Q5VWM3 479 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 TMX3Q96JJ7 454 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 WRNIP1Q96S55 665 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 TMEM47Q9BQJ4 181 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 WDR18Q9BV38 432 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 AS3MTQ9HBK9 375 aa22.2■■□□□ 1.14
SNX4-203ENST00000471751 KLF18A0A0U1RQI7 1052 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 USP17L5A8MUK1 530 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 ZBTB43O43298 467 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 CD2BP2O95400 341 aaKnown RBP22.19■■□□□ 1.14
SNX4-203ENST00000471751 ICA1Q05084 483 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 TROAPQ12815 778 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 CUL4AQ13619 759 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 RRP1BQ14684 758 aaKnown RBP22.19■■□□□ 1.14
SNX4-203ENST00000471751 SEPT2Q15019 361 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 ZNF654Q8IZM8 581 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 SLKQ9H2G2 1235 aaPredicted RBP22.19■■□□□ 1.14
SNX4-203ENST00000471751 PICK1Q9NRD5 415 aa22.19■■□□□ 1.14
SNX4-203ENST00000471751 DOCK1Q14185 1865 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 NMT2O60551 498 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 GDF11O95390 407 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 SMARCA1P28370 1054 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 KIF5BP33176 963 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 APOBRQ0VD83 1088 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 ME3Q16798 604 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 PNMA1Q8ND90 353 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 GMCL1P1Q8NEA9 526 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 IPO9Q96P70 1041 aaKnown RBP22.18■■□□□ 1.14
SNX4-203ENST00000471751 LLPHQ9BRT6 129 aaKnown RBP22.18■■□□□ 1.14
SNX4-203ENST00000471751 RBM28Q9NW13 759 aaKnown RBP22.18■■□□□ 1.14
SNX4-203ENST00000471751 CLIP2Q9UDT6 1046 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 DAXXQ9UER7 740 aaPredicted RBP22.18■■□□□ 1.14
SNX4-203ENST00000471751 BRPF3Q9ULD4 1205 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 TMX2Q9Y320 296 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 CSADQ9Y600 493 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 ATAD5Q96QE3 1844 aa22.18■■□□□ 1.14
SNX4-203ENST00000471751 MYH4Q9Y623 1939 aa22.17■■□□□ 1.14
SNX4-203ENST00000471751 EEF2P13639 858 aaKnown RBP22.17■■□□□ 1.14
SNX4-203ENST00000471751 PDIA4P13667 645 aaKnown RBP22.17■■□□□ 1.14
SNX4-203ENST00000471751 GNAQP50148 359 aa22.17■■□□□ 1.14
SNX4-203ENST00000471751 RAB3GAP1Q15042 981 aa22.17■■□□□ 1.14
SNX4-203ENST00000471751 LDLRAD1Q5T700 205 aa22.17■■□□□ 1.14
SNX4-203ENST00000471751 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.17■■□□□ 1.14
SNX4-203ENST00000471751 TRPM7Q96QT4 1865 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 SLURP2P0DP57 97 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 INPP5BP32019 993 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 CPLX2Q6PUV4 134 aaKnown RBP22.16■■□□□ 1.14
SNX4-203ENST00000471751 SIAH1Q8IUQ4 282 aa22.16■■□□□ 1.14
SNX4-203ENST00000471751 C2orf69Q8N8R5 385 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms