RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 PCP11498 1178 aaKnown RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 GTF2E1P29083 439 aaPredicted RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 HIBADHP31937 336 aaKnown RBP7.44□□□□□ -1.22
SPEN-204ENST00000471538 ME1P48163 572 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 APLP1P51693 650 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 NDUFA8P51970 172 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 MECOMQ03112 1051 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 NFIXQ14938 502 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 WTAPQ15007 396 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 SLC39A14Q15043 492 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 STK38Q15208 465 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 SASS6Q6UVJ0 657 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 NFXL1Q6ZNB6 911 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 CCDC73Q6ZRK6 1079 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 TXNRD3Q86VQ6 643 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 PLA2G4DQ86XP0 818 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 CCDC144CPQ8IYA2 1237 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 TMTC2Q8N394 836 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 ZKSCAN3Q9BRR0 538 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.44□□□□□ -1.22
SPEN-204ENST00000471538 DNAJC25Q9H1X3 360 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 HPSEQ9Y251 543 aa7.44□□□□□ -1.22
SPEN-204ENST00000471538 LTBP1Q14766 1721 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 MYH2Q9UKX2 1941 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 MROH7-TTC4A0A0A0MT08 1334 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 TNKSO95271 1327 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 DDX60LQ5H9U9 1706 aaKnown RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 ORC4O43929 436 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 KINO60870 393 aaKnown RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 WDHD1O75717 1129 aaPredicted RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 MMP1P03956 469 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 CMA1P23946 247 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 GUCY1A2P33402 732 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 ZNF165P49910 485 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 SSRP1Q08945 709 aaKnown RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 FUT2Q10981 343 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 GRAPQ13588 217 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 SART3Q15020 963 aaKnown RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 STX1AQ16623 288 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 RTN1Q16799 776 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 SBK1Q52WX2 424 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 RRP12Q5JTH9 1297 aaKnown RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 TRAPPC3LQ5T215 181 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 CTR9Q6PD62 1173 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 C11orf57Q6ZUT1 292 aaPredicted RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 C15orf52Q6ZUT6 534 aaKnown RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 SLC51AQ86UW1 340 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 ZNF654Q8IZM8 581 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 CCDC24Q8N4L8 307 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 CRACR2BQ8N4Y2 399 aaPredicted RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 GRAPLQ8TC17 118 aaPredicted RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 WASF1Q92558 559 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 ESR2Q92731 530 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 SHISA4Q96DD7 197 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 SLC26A6Q9BXS9 759 aa7.43□□□□□ -1.22
SPEN-204ENST00000471538 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.43□□□□□ -1.22
SPEN-204ENST00000471538 CYP2D7A0A087X1C5 515 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 A0A1B0GVL5 298 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 MINDY4BA8MYZ0 360 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 DEXIO95424 95 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 PTMAP06454 111 aaKnown RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 PFKFB1P16118 471 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 PRDX5P30044 214 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 RFC4P35249 363 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 ZNF75DP51815 510 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 PPP2R5BQ15173 497 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 SF3A1Q15459 793 aaKnown RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 CRY2Q49AN0 593 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 PRR5LQ6MZQ0 368 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 SARM1Q6SZW1 724 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 SYNE3Q6ZMZ3 975 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 DHX40Q8IX18 779 aaKnown RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 ENAHQ8N8S7 591 aaPredicted RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 FANCBQ8NB91 859 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 PIBF1Q8WXW3 757 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 ZSCAN10Q96SZ4 725 aaPredicted RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 RNF26Q9BY78 433 aaPredicted RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 KCNF1Q9H3M0 494 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 NMRK2Q9NPI5 230 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 DCP1AQ9NPI6 582 aaPredicted RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 MKRN1Q9UHC7 482 aaKnown RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 LEMD3Q9Y2U8 911 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 MORC2Q9Y6X9 1032 aaPredicted RBP7.42□□□□□ -1.22
SPEN-204ENST00000471538 NAV1Q8NEY1 1877 aa7.42□□□□□ -1.22
SPEN-204ENST00000471538 MYH6P13533 1939 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 KIF13BQ9NQT8 1826 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 CDK5RAP2Q96SN8 1893 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 ROBO3Q96MS0 1386 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 CCDC196A0A1B0GTZ2 297 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 ERICH2A1L162 156 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 USP17L12C9JPN9 530 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 USP17L21D6R901 530 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 TPM3P06753 285 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 GYS1P13807 737 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 CDC25BP30305 580 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 TOB1P50616 345 aaPredicted RBP7.41□□□□□ -1.22
SPEN-204ENST00000471538 TERF1P54274 439 aa7.41□□□□□ -1.22
SPEN-204ENST00000471538 KIAA2012Q0VF49 1180 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms