RNA–Protein interactions for RNA: ENST00000471357.1

LINC00880-201, long intergenic non-protein coding RNA 880, humanhuman

TSL 1 (best) BASIC

Gene LINC00880, Length 2,018 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00880-201ENST00000471357 ATP6V1DQ9Y5K8 247 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 PLIN4Q96Q06 1357 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 GOLGA6L22H0YM25 854 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 YBX3P16989 372 aaKnown RBP eCLIP13.93□□□□□ -0.18
LINC00880-201ENST00000471357 SSRP1Q08945 709 aaKnown RBP13.93□□□□□ -0.18
LINC00880-201ENST00000471357 RBM26Q5T8P6 1007 aaKnown RBP13.93□□□□□ -0.18
LINC00880-201ENST00000471357 CTCFLQ8NI51 663 aaPredicted RBP13.93□□□□□ -0.18
LINC00880-201ENST00000471357 PHKBQ93100 1093 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 CEP95Q96GE4 821 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 CSRNP1Q96S65 589 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 TMEM47Q9BQJ4 181 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 ANP32EQ9BTT0 268 aa13.93□□□□□ -0.18
LINC00880-201ENST00000471357 SLURP2P0DP57 97 aa13.92□□□□□ -0.18
LINC00880-201ENST00000471357 NOVP48745 357 aa13.92□□□□□ -0.18
LINC00880-201ENST00000471357 MCTP1Q6DN14 999 aa13.92□□□□□ -0.18
LINC00880-201ENST00000471357 FAM83AQ86UY5 434 aa13.92□□□□□ -0.18
LINC00880-201ENST00000471357 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC00880-201ENST00000471357 SLC26A6Q9BXS9 759 aa13.92□□□□□ -0.18
LINC00880-201ENST00000471357 STK36Q9NRP7 1315 aa13.92□□□□□ -0.18
LINC00880-201ENST00000471357 IGKV6D-41A0A0C4DH26 115 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 FAM196BA6NMK8 535 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 FMNL1O95466 1100 aaPredicted RBP13.91□□□□□ -0.18
LINC00880-201ENST00000471357 CERKLQ49MI3 558 aaPredicted RBP13.91□□□□□ -0.18
LINC00880-201ENST00000471357 TATDN1Q6P1N9 297 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 TRIM22Q8IYM9 498 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 GPC2Q8N158 579 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 MAP3K14Q99558 947 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 MTMR4Q9NYA4 1195 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 CNTNAP1P78357 1384 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 DICER1Q9UPY3 1922 aaKnown RBP13.91□□□□□ -0.18
LINC00880-201ENST00000471357 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 H7C1D1 291 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 EGFRP00533 1210 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 TOP1P11387 765 aaKnown RBP13.91□□□□□ -0.18
LINC00880-201ENST00000471357 KIF5BP33176 963 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 TNNI2P48788 182 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 FOSBP53539 338 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 SAMD7Q7Z3H4 446 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 CMTR1Q8N1G2 835 aaKnown RBP13.91□□□□□ -0.18
LINC00880-201ENST00000471357 CCDC82Q8N4S0 544 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 RGS22Q8NE09 1264 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 WASF1Q92558 559 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 C8orf76Q96K31 380 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 ALG1Q9BT22 464 aa13.91□□□□□ -0.18
LINC00880-201ENST00000471357 HERC5Q9UII4 1024 aaKnown RBP13.91□□□□□ -0.18
LINC00880-201ENST00000471357 MYH8P13535 1937 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 MPHOSPH10O00566 681 aaKnown RBP13.9□□□□□ -0.18
LINC00880-201ENST00000471357 PTMSP20962 102 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 FOXD4L6Q3SYB3 417 aaPredicted RBP13.9□□□□□ -0.18
LINC00880-201ENST00000471357 TBC1D10BQ4KMP7 808 aaPredicted RBP13.9□□□□□ -0.18
LINC00880-201ENST00000471357 FOXD4L3Q6VB84 417 aaPredicted RBP13.9□□□□□ -0.18
LINC00880-201ENST00000471357 TMTC3Q6ZXV5 915 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 FERMT3Q86UX7 667 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 CHAMP1Q96JM3 812 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 RNF181Q9P0P0 153 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 SBF1O95248 1867 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 GUCY1B3Q02153 619 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 KIF4BQ2VIQ3 1234 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 PPP4R3BQ5MIZ7 849 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 FBXO18Q8NFZ0 1043 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 RNF26Q9BY78 433 aaPredicted RBP13.9□□□□□ -0.18
LINC00880-201ENST00000471357 TMEM39BQ9GZU3 492 aa13.9□□□□□ -0.18
LINC00880-201ENST00000471357 ZSCAN16Q9H4T2 348 aaPredicted RBP13.9□□□□□ -0.18
LINC00880-201ENST00000471357 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.9□□□□□ -0.18
LINC00880-201ENST00000471357 PLEKHA8P1O95397 391 aa13.89□□□□□ -0.19
LINC00880-201ENST00000471357 DEXIO95424 95 aa13.89□□□□□ -0.19
LINC00880-201ENST00000471357 TTLL1O95922 423 aa13.89□□□□□ -0.19
LINC00880-201ENST00000471357 AKAP17AQ02040 695 aaKnown RBP13.89□□□□□ -0.19
LINC00880-201ENST00000471357 TNFAIP1Q13829 316 aa13.89□□□□□ -0.19
LINC00880-201ENST00000471357 GRM4Q14833 912 aa13.89□□□□□ -0.19
LINC00880-201ENST00000471357 AIFM3Q96NN9 605 aa13.89□□□□□ -0.19
LINC00880-201ENST00000471357 GPRC5DQ9NZD1 345 aa13.89□□□□□ -0.19
LINC00880-201ENST00000471357 GNAQP50148 359 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 FUT2Q10981 343 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 RESTQ13127 1097 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 OTUD7BQ6GQQ9 843 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 SRBD1Q8N5C6 995 aaKnown RBP13.88□□□□□ -0.19
LINC00880-201ENST00000471357 CLIP2Q9UDT6 1046 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 PRPF3O43395 683 aaKnown RBP13.88□□□□□ -0.19
LINC00880-201ENST00000471357 RASA3Q14644 834 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 ABCB5Q2M3G0 1257 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 C9orf131Q5VYM1 1079 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 PGAP2Q9UHJ9 254 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 MAD2L2Q9UI95 211 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 MTMR7Q9Y216 660 aa13.88□□□□□ -0.19
LINC00880-201ENST00000471357 UBE2Q2LH0YL09 131 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 TBC1D12O60347 775 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 GDF11O95390 407 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 GUCY1A2P33402 732 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 DNM1Q05193 864 aaKnown RBP13.87□□□□□ -0.19
LINC00880-201ENST00000471357 TRIM29Q14134 588 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 TMEM179Q6ZVK1 233 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 KANSL2Q9H9L4 492 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 GJB4Q9NTQ9 266 aa13.87□□□□□ -0.19
LINC00880-201ENST00000471357 V9GY48 417 aaPredicted RBP13.87□□□□□ -0.19
LINC00880-201ENST00000471357 PALM3A6NDB9 673 aaPredicted RBP13.86□□□□□ -0.19
LINC00880-201ENST00000471357 DDNO94850 711 aaPredicted RBP13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms