RNA–Protein interactions for RNA: ENST00000469528.5

GAPVD1-214, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 4

Gene GAPVD1, Length 466 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-214ENST00000469528 MS4A1P11836 297 aa15.4■□□□□ 0.06
GAPVD1-214ENST00000469528 JAG1P78504 1218 aa15.4■□□□□ 0.06
GAPVD1-214ENST00000469528 MAP2K5Q13163 448 aa15.4■□□□□ 0.06
GAPVD1-214ENST00000469528 MIGA1Q8NAN2 632 aa15.4■□□□□ 0.06
GAPVD1-214ENST00000469528 EAF2Q96CJ1 260 aaPredicted RBP15.4■□□□□ 0.06
GAPVD1-214ENST00000469528 APBA2Q99767 749 aa15.4■□□□□ 0.06
GAPVD1-214ENST00000469528 HOXC10Q9NYD6 342 aa15.4■□□□□ 0.06
GAPVD1-214ENST00000469528 SLC15A5A6NIM6 579 aa15.39■□□□□ 0.05
GAPVD1-214ENST00000469528 ATP2B2Q01814 1243 aa15.39■□□□□ 0.05
GAPVD1-214ENST00000469528 WDR78Q5VTH9 848 aa15.39■□□□□ 0.05
GAPVD1-214ENST00000469528 ZMYND8Q9ULU4 1186 aaPredicted RBP15.39■□□□□ 0.05
GAPVD1-214ENST00000469528 MAGEB6P1A0A0J9YX57 407 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 STRNO43815 780 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 ZYXQ15942 572 aaKnown RBP15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 LRIT3Q3SXY7 679 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 LBX2Q6XYB7 198 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 AACSQ86V21 672 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 TDHQ8IZJ6 230 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 CRNKL1Q9BZJ0 848 aaKnown RBP15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 UBE2OQ9C0C9 1292 aaKnown RBP15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 PORCNQ9H237 461 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 C1orf115Q9H7X2 142 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 SLC5A4Q9NY91 659 aa15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 RANBP2P49792 3224 aaKnown RBP15.38■□□□□ 0.05
GAPVD1-214ENST00000469528 PTPREP23469 700 aa15.37■□□□□ 0.05
GAPVD1-214ENST00000469528 MNX1P50219 401 aaPredicted RBP15.37■□□□□ 0.05
GAPVD1-214ENST00000469528 COG2Q14746 738 aa15.37■□□□□ 0.05
GAPVD1-214ENST00000469528 LHX8Q68G74 356 aa15.37■□□□□ 0.05
GAPVD1-214ENST00000469528 CLASRPQ8N2M8 674 aaKnown RBP15.37■□□□□ 0.05
GAPVD1-214ENST00000469528 COL6A1P12109 1028 aa15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 SYN1P17600 705 aa15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 CCND3P30281 292 aaPredicted RBP15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 MAGEA10P43363 369 aaPredicted RBP15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 SLC9C2Q5TAH2 1124 aa15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 CEP85Q6P2H3 762 aa15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 DPP9Q86TI2 863 aa15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 CHMP4BQ9H444 224 aaKnown RBP15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 TLR7Q9NYK1 1049 aaKnown RBP15.36■□□□□ 0.05
GAPVD1-214ENST00000469528 SOX1O00570 391 aaPredicted RBP15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 PEX10O60683 326 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 HOXC6P09630 235 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 VCAM1P19320 739 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 CNGA1P29973 690 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 PLCD1P51178 756 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 CCL14Q16627 93 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 SHROOM1Q2M3G4 852 aaPredicted RBP15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 LRCH3Q96II8 777 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 LBHD1Q9BQE6 289 aaPredicted RBP15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 RPAP3Q9H6T3 665 aaPredicted RBP15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 ANTXR1Q9H6X2 564 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 MCM9Q9NXL9 1143 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 PRKAG2Q9UGJ0 569 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 SZT2Q5T011 3432 aa15.35■□□□□ 0.05
GAPVD1-214ENST00000469528 MPHOSPH10O00566 681 aaKnown RBP15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 HMMRO75330 724 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 IFIT2P09913 472 aaKnown RBP15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 HNRNPUQ00839 825 aaKnown RBP eCLIP15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 RPAP2Q8IXW5 612 aaPredicted RBP15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 AMOTL1Q8IY63 956 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 DEFB123Q8N688 67 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 MB21D1Q8N884 522 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 ARRDC4Q8NCT1 418 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 LPAR1Q92633 364 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 KIF1BPQ96EK5 621 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 SH2D4AQ9H788 454 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 SWAP70Q9UH65 585 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 DDX20Q9UHI6 824 aaKnown RBP15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 EXOC6BQ9Y2D4 811 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 MAST2Q6P0Q8 1798 aa15.34■□□□□ 0.05
GAPVD1-214ENST00000469528 DLL1O00548 723 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 CNMDO75829 334 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 SHMT1P34896 483 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 GRB14Q14449 540 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 RHPN1Q8TCX5 695 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 ACER1Q8TDN7 264 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 DDRGK1Q96HY6 314 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 RIOK1Q9BRS2 568 aaKnown RBP15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 PFASO15067 1338 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 FOCADQ5VW36 1801 aa15.33■□□□□ 0.04
GAPVD1-214ENST00000469528 PLXNB2O15031 1838 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 RAB11FIP3O75154 756 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 RLBP1P12271 317 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 SEPT2Q15019 361 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 POTEEQ6S8J3 1075 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 TMEM179Q6ZVK1 233 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 SHCBP1Q8NEM2 672 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 CCDC17Q96LX7 622 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 TANGO6Q9C0B7 1094 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 MROH8Q9H579 483 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 ARHGEF10LQ9HCE6 1279 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 ATP8A2Q9NTI2 1148 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 BTBD7Q9P203 1132 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 NDUFB9Q9Y6M9 179 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 MYH1P12882 1939 aa15.32■□□□□ 0.04
GAPVD1-214ENST00000469528 SIPA1L1O43166 1804 aa15.31■□□□□ 0.04
GAPVD1-214ENST00000469528 SPDYE16A6NNV3 312 aaPredicted RBP15.31■□□□□ 0.04
GAPVD1-214ENST00000469528 DNM1LO00429 736 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms