RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 RGS2P41220 211 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 PLCD1P51178 756 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 MAP3K12Q12852 859 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 ZYXQ15942 572 aaKnown RBP14.92□□□□□ -0.02
COL5A1-207ENST00000469093 CERKLQ49MI3 558 aaPredicted RBP14.92□□□□□ -0.02
COL5A1-207ENST00000469093 CEP85Q6P2H3 762 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 CATSPERGQ6ZRH7 1159 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 ACER1Q8TDN7 264 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 PFASO15067 1338 aa14.92□□□□□ -0.02
COL5A1-207ENST00000469093 COL6A1P12109 1028 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 SYN1P17600 705 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 MAP2K5Q13163 448 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 RAB3GAP1Q15042 981 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 ABCB5Q2M3G0 1257 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 TMED8Q6PL24 325 aaPredicted RBP14.91□□□□□ -0.02
COL5A1-207ENST00000469093 AACSQ86V21 672 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 EDC3Q96F86 508 aaKnown RBP14.91□□□□□ -0.02
COL5A1-207ENST00000469093 FEZ1Q99689 392 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 RIOK1Q9BRS2 568 aaKnown RBP14.91□□□□□ -0.02
COL5A1-207ENST00000469093 KIAA1683Q9H0B3 1180 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 EXOC6BQ9Y2D4 811 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 ALPK3Q96L96 1907 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 CDK5RAP2Q96SN8 1893 aa14.91□□□□□ -0.02
COL5A1-207ENST00000469093 VCAM1P19320 739 aa14.9□□□□□ -0.02
COL5A1-207ENST00000469093 GUCY1A2P33402 732 aa14.9□□□□□ -0.02
COL5A1-207ENST00000469093 SHMT1P34896 483 aa14.9□□□□□ -0.02
COL5A1-207ENST00000469093 MAGEA10P43363 369 aaPredicted RBP14.9□□□□□ -0.02
COL5A1-207ENST00000469093 USP14P54578 494 aa14.9□□□□□ -0.02
COL5A1-207ENST00000469093 CCNA1P78396 465 aa14.9□□□□□ -0.02
COL5A1-207ENST00000469093 APBA2Q99767 749 aa14.9□□□□□ -0.02
COL5A1-207ENST00000469093 CABP5Q9NP86 173 aa14.9□□□□□ -0.02
COL5A1-207ENST00000469093 FOCADQ5VW36 1801 aa14.89□□□□□ -0.03
COL5A1-207ENST00000469093 LAMA3Q16787 3333 aa14.89□□□□□ -0.03
COL5A1-207ENST00000469093 HNRNPUQ00839 825 aaKnown RBP eCLIP14.89□□□□□ -0.03
COL5A1-207ENST00000469093 GABPAQ06546 454 aa14.89□□□□□ -0.03
COL5A1-207ENST00000469093 LBX2Q6XYB7 198 aa14.89□□□□□ -0.03
COL5A1-207ENST00000469093 ERC1Q8IUD2 1116 aa14.89□□□□□ -0.03
COL5A1-207ENST00000469093 FLRT1Q9NZU1 646 aa14.89□□□□□ -0.03
COL5A1-207ENST00000469093 BTBD7Q9P203 1132 aa14.89□□□□□ -0.03
COL5A1-207ENST00000469093 MAST2Q6P0Q8 1798 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 MAGEB6P1A0A0J9YX57 407 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 SLC15A5A6NIM6 579 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 GLRX3O76003 335 aaKnown RBP14.88□□□□□ -0.03
COL5A1-207ENST00000469093 POLR3DP05423 398 aaPredicted RBP14.88□□□□□ -0.03
COL5A1-207ENST00000469093 PTPREP23469 700 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 SEPT2Q15019 361 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 SLC9C2Q5TAH2 1124 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 SLC17A8Q8NDX2 589 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 CWC22Q9HCG8 908 aaKnown RBP14.88□□□□□ -0.03
COL5A1-207ENST00000469093 IL1RAPL2Q9NP60 686 aa14.88□□□□□ -0.03
COL5A1-207ENST00000469093 A0A1W2PRG0 241 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 SPDYE16A6NNV3 312 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-207ENST00000469093 HOXC6P09630 235 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 EVX2Q03828 476 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 TTF1Q15361 905 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-207ENST00000469093 LRRC26Q2I0M4 334 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 LRIT3Q3SXY7 679 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 WDR78Q5VTH9 848 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 MFSD14CQ5VZR4 134 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 GPR153Q6NV75 609 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 NPLOC4Q8TAT6 608 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 RHPN1Q8TCX5 695 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 PANK1Q8TE04 598 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 RPAP3Q9H6T3 665 aaPredicted RBP14.87□□□□□ -0.03
COL5A1-207ENST00000469093 MYH1P12882 1939 aa14.87□□□□□ -0.03
COL5A1-207ENST00000469093 DDX60LQ5H9U9 1706 aaKnown RBP14.86□□□□□ -0.03
COL5A1-207ENST00000469093 IGHA2P01877 340 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 PDE6AP16499 860 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 ATP2B2Q01814 1243 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 GRB14Q14449 540 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 COG2Q14746 738 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 HSP90AB4PQ58FF6 505 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 TDHQ8IZJ6 230 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 UBE2OQ9C0C9 1292 aaKnown RBP14.86□□□□□ -0.03
COL5A1-207ENST00000469093 MCM9Q9NXL9 1143 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 HOXC10Q9NYD6 342 aa14.86□□□□□ -0.03
COL5A1-207ENST00000469093 CRNKL1Q9BZJ0 848 aaKnown RBP14.85□□□□□ -0.03
COL5A1-207ENST00000469093 DCP1AQ9NPI6 582 aaPredicted RBP14.85□□□□□ -0.03
COL5A1-207ENST00000469093 DDX20Q9UHI6 824 aaKnown RBP14.85□□□□□ -0.03
COL5A1-207ENST00000469093 IVNS1ABPQ9Y6Y0 642 aa14.85□□□□□ -0.03
COL5A1-207ENST00000469093 ZNF532Q9HCE3 1301 aa14.85□□□□□ -0.03
COL5A1-207ENST00000469093 TCRBV5S4A2TA0A5A2 114 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 APBB1O00213 710 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 GOLIM4O00461 696 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 MPHOSPH10O00566 681 aaKnown RBP14.84□□□□□ -0.03
COL5A1-207ENST00000469093 CYP2C19P33261 490 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 KIAA1755Q5JYT7 1200 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
COL5A1-207ENST00000469093 DEFB123Q8N688 67 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 TRPV1Q8NER1 839 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL5A1-207ENST00000469093 SDR42E1Q8WUS8 393 aa14.84□□□□□ -0.03
COL5A1-207ENST00000469093 MOV10L1Q9BXT6 1211 aaKnown RBP14.84□□□□□ -0.03
COL5A1-207ENST00000469093 SENP6Q9GZR1 1112 aaPredicted RBP14.84□□□□□ -0.03
COL5A1-207ENST00000469093 DLL1O00548 723 aa14.83□□□□□ -0.04
COL5A1-207ENST00000469093 STRNO43815 780 aa14.83□□□□□ -0.04
COL5A1-207ENST00000469093 MSCO60682 206 aa14.83□□□□□ -0.04
COL5A1-207ENST00000469093 CYP2D6P10635 497 aa14.83□□□□□ -0.04
COL5A1-207ENST00000469093 CNGA1P29973 690 aa14.83□□□□□ -0.04
COL5A1-207ENST00000469093 MDM2Q00987 491 aaPredicted RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms