RNA–Protein interactions for RNA: ENST00000468963.1

SDCCAG3-209, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-209ENST00000468963 USP17L13C9JLJ4 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP17L11C9JVI0 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP17L18D6R9N7 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP17L22D6RA61 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP17L17D6RBQ6 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP17L19D6RCP7 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP17L20D6RJB6 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 ADD2P35612 726 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 ERVK-9P63128 1117 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 ERVK-24P63145 666 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP17L24Q0WX57 530 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 TRIM32Q13049 653 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 CATSPERGQ6ZRH7 1159 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 GTF3C2Q8WUA4 911 aaPredicted RBP17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 SDR42E1Q8WUS8 393 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP6NLQ92738 828 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 BCL11AQ9H165 835 aa17.91■□□□□ 0.46
SDCCAG3-209ENST00000468963 CNMDO75829 334 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 FARP2O94887 1054 aaPredicted RBP17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 HMGCRP04035 888 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 XRCC5P13010 732 aaKnown RBP17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 USP14P54578 494 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 ZYXQ15942 572 aaKnown RBP17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 HTATIP2Q9BUP3 242 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 PORCNQ9H237 461 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 ARMT1Q9H993 441 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 RABGAP1Q9Y3P9 1069 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 PLXNB2O15031 1838 aa17.9■□□□□ 0.46
SDCCAG3-209ENST00000468963 PRKAB2O43741 272 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 CYP2D6P10635 497 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 CYP2B6P20813 491 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 MAPK4P31152 587 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 SEPT2Q15019 361 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 MORN1Q5T089 497 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 TRIB2Q92519 343 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 FEZ1Q99689 392 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 NUDT12Q9BQG2 462 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 LRRCC1Q9C099 1032 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 RPTORQ8N122 1335 aa17.89■□□□□ 0.45
SDCCAG3-209ENST00000468963 A0A1W2PRG0 241 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 SMARCA5O60264 1052 aaPredicted RBP17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 CHGBP05060 677 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 VCAM1P19320 739 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 UBE3CQ15386 1083 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 MAP3K21Q5TCX8 1036 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 LBX2Q6XYB7 198 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 PAGR1Q9BTK6 254 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 HMX1Q9NP08 348 aaPredicted RBP17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 ATP8A2Q9NTI2 1148 aa17.88■□□□□ 0.45
SDCCAG3-209ENST00000468963 MBD4O95243 580 aa17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 GPR142Q7Z601 462 aa17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 PLEKHH3Q7Z736 793 aa17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 SIAH1Q8IUQ4 282 aa17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 SLC44A5Q8NCS7 719 aa17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 SOCS4Q8WXH5 440 aa17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 DCTPP1Q9H773 170 aa17.87■□□□□ 0.45
SDCCAG3-209ENST00000468963 DDX60LQ5H9U9 1706 aaKnown RBP17.86■□□□□ 0.45
SDCCAG3-209ENST00000468963 FXR1P51114 621 aaKnown RBP eCLIP17.86■□□□□ 0.45
SDCCAG3-209ENST00000468963 DYNLL2Q96FJ2 89 aa17.86■□□□□ 0.45
SDCCAG3-209ENST00000468963 PAWRQ96IZ0 340 aaKnown RBP17.86■□□□□ 0.45
SDCCAG3-209ENST00000468963 RPAP3Q9H6T3 665 aaPredicted RBP17.86■□□□□ 0.45
SDCCAG3-209ENST00000468963 BTBD7Q9P203 1132 aa17.86■□□□□ 0.45
SDCCAG3-209ENST00000468963 SWAP70Q9UH65 585 aa17.86■□□□□ 0.45
SDCCAG3-209ENST00000468963 SMIM22K7EJ46 135 aa17.85■□□□□ 0.45
SDCCAG3-209ENST00000468963 MNX1P50219 401 aaPredicted RBP17.85■□□□□ 0.45
SDCCAG3-209ENST00000468963 C12orf60Q5U649 245 aa17.85■□□□□ 0.45
SDCCAG3-209ENST00000468963 CCAR1Q8IX12 1150 aaKnown RBP17.85■□□□□ 0.45
SDCCAG3-209ENST00000468963 TRMT44Q8IYL2 757 aaKnown RBP17.85■□□□□ 0.45
SDCCAG3-209ENST00000468963 ANKLE1Q8NAG6 615 aa17.85■□□□□ 0.45
SDCCAG3-209ENST00000468963 NR2E3Q9Y5X4 410 aa17.85■□□□□ 0.45
SDCCAG3-209ENST00000468963 SPDYE16A6NNV3 312 aaPredicted RBP17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 USP17L12C9JPN9 530 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 USP17L21D6R901 530 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 MPHOSPH10O00566 681 aaKnown RBP17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 RGS2P41220 211 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 KIAA1755Q5JYT7 1200 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 TMEM179Q6ZVK1 233 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 DIS3LQ8TF46 1054 aaKnown RBP17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 PUS7LQ9H0K6 701 aaKnown RBP17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 PRO3102Q9H379 93 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 ECHDC1Q9NTX5 307 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 OGDHLQ9ULD0 1010 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 NAV1Q8NEY1 1877 aa17.84■□□□□ 0.45
SDCCAG3-209ENST00000468963 SZT2Q5T011 3432 aa17.83■□□□□ 0.45
SDCCAG3-209ENST00000468963 CYP2D7A0A087X1C5 515 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 PRKAR2AP13861 404 aaKnown RBP17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 AKR1B1P15121 316 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 PTPREP23469 700 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 CDK8P49336 464 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 CCNA1P78396 465 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 CACNB2Q08289 660 aaPredicted RBP17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 MAP2K5Q13163 448 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 COG2Q14746 738 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 CCL14Q16627 93 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 ZSCAN25Q6NSZ9 544 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 CHRDL2Q6WN34 429 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 NECAB2Q7Z6G3 386 aa17.83■□□□□ 0.44
SDCCAG3-209ENST00000468963 HOXC10Q9NYD6 342 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms