RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 UBXN4Q92575 508 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 UBAC1Q9BSL1 405 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 CSRNP2Q9H175 543 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 DOCK2Q92608 1830 aa18.03■□□□□ 0.48
TSPAN4-211ENST00000468468 SLFN14P0C7P3 912 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 ADKP55263 362 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 SPECC1LQ69YQ0 1117 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 USP49Q70CQ1 688 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 MTA3Q9BTC8 594 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 RTL9Q8NET4 1388 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 ACTN4O43707 911 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 CLCN6P51797 869 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 PPARAQ07869 468 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 BMS1Q14692 1282 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 KANK3Q6NY19 840 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 TRIML1Q8N9V2 468 aa18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 SRRTQ9BXP5 876 aaKnown RBP18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 IQSEC3Q9UPP2 1182 aaPredicted RBP18.02■□□□□ 0.48
TSPAN4-211ENST00000468468 BCORQ6W2J9 1755 aa18.02■□□□□ 0.47
TSPAN4-211ENST00000468468 CNTNAP4Q9C0A0 1308 aa18.02■□□□□ 0.47
TSPAN4-211ENST00000468468 MINDY4BA8MYZ0 360 aa18.02■□□□□ 0.47
TSPAN4-211ENST00000468468 AMIGO3Q86WK7 504 aa18.02■□□□□ 0.47
TSPAN4-211ENST00000468468 TC2NQ8N9U0 490 aa18.02■□□□□ 0.47
TSPAN4-211ENST00000468468 SAMSN1Q9NSI8 373 aaKnown RBP18.02■□□□□ 0.47
TSPAN4-211ENST00000468468 STX10O60499 249 aa18.01■□□□□ 0.47
TSPAN4-211ENST00000468468 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
TSPAN4-211ENST00000468468 MED15Q96RN5 788 aa18.01■□□□□ 0.47
TSPAN4-211ENST00000468468 CARD6Q9BX69 1037 aa18.01■□□□□ 0.47
TSPAN4-211ENST00000468468 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
TSPAN4-211ENST00000468468 CYP7A1P22680 504 aa18.01■□□□□ 0.47
TSPAN4-211ENST00000468468 RCAN1P53805 252 aa18.01■□□□□ 0.47
TSPAN4-211ENST00000468468 GNPATO15228 680 aa18■□□□□ 0.47
TSPAN4-211ENST00000468468 AKAP17AQ02040 695 aaKnown RBP18■□□□□ 0.47
TSPAN4-211ENST00000468468 SDR42E1Q8WUS8 393 aa18■□□□□ 0.47
TSPAN4-211ENST00000468468 CDC5LQ99459 802 aaKnown RBP18■□□□□ 0.47
TSPAN4-211ENST00000468468 NOL10Q9BSC4 688 aaKnown RBP18■□□□□ 0.47
TSPAN4-211ENST00000468468 TERF2Q15554 542 aa18■□□□□ 0.47
TSPAN4-211ENST00000468468 TOGARAM2Q6ZUX3 1019 aa18■□□□□ 0.47
TSPAN4-211ENST00000468468 RAI14Q9P0K7 980 aa18■□□□□ 0.47
TSPAN4-211ENST00000468468 TNKSO95271 1327 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 GOLGA6L9A6NEM1 432 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 FAM205CA6NFA0 338 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 CASQ1P31415 396 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 PLCD1P51178 756 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 GNG11P61952 73 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 ANKRD18AQ8IVF6 992 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 ESR2Q92731 530 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 DHX58Q96C10 678 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 RNF26Q9BY78 433 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 VPS54Q9P1Q0 977 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 CCNL1Q9UK58 526 aaPredicted RBP17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 LAMB2P55268 1798 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 TAF1P21675 1872 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 TADA3O75528 432 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 SEC23AQ15436 765 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 TAF3Q5VWG9 929 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 ADGRA1Q86SQ6 560 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 SPATA20Q8TB22 786 aa17.99■□□□□ 0.47
TSPAN4-211ENST00000468468 TRIM75PA6NK02 468 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 XBP1P17861 261 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 ERCC5P28715 1186 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 NR1I3Q14994 352 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 CELF1Q92879 486 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 SHISA4Q96DD7 197 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 WDR24Q96S15 920 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 ST7Q9NRC1 585 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 ARGLU1Q9NWB6 273 aaPredicted RBP17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 ABCF2Q9UG63 623 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 FHOD1Q9Y613 1164 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 ZNF831Q5JPB2 1677 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 EFCAB8A8MWE9 144 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 SMIM22K7EJ46 135 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 RPS6KA4O75676 772 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 AFMP43652 599 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 SF3B3Q15393 1217 aaKnown RBP17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 AATFQ9NY61 560 aaKnown RBP eCLIP17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 NARFQ9UHQ1 456 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 BTAF1O14981 1849 aa17.98■□□□□ 0.47
TSPAN4-211ENST00000468468 hCG_1642624A0A1W2PR95 340 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 GYG1P46976 350 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 EPSTI1Q96J88 318 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 A0A087X0B3 334 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 MAGEB6P1A0A0J9YX57 407 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 KRT2P35908 639 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 PPP2R5BQ15173 497 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 EARS2Q5JPH6 523 aaKnown RBP17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 CCDC34Q96HJ3 373 aa17.97■□□□□ 0.47
TSPAN4-211ENST00000468468 PRDM1O75626 825 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 PKN1Q16512 942 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 KLHL10Q6JEL2 608 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 TMCO3Q6UWJ1 677 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 SPATA31A6Q5VVP1 1343 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 A0A1B0GTH6 734 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 PNMA6AP0CW24 399 aaPredicted RBP17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 RC3H1Q5TC82 1133 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 MEX3CQ5U5Q3 659 aaKnown RBP17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 DESI2Q9BSY9 194 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 PHF20Q9BVI0 1012 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 ANAPC4Q9UJX5 808 aa17.96■□□□□ 0.47
TSPAN4-211ENST00000468468 ZPR1O75312 459 aa17.96■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms