RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 USP17L17D6RBQ6 530 aa22.94■■□□□ 1.26
COL7A1-207ENST00000467985 USP17L19D6RCP7 530 aa22.94■■□□□ 1.26
COL7A1-207ENST00000467985 USP17L20D6RJB6 530 aa22.94■■□□□ 1.26
COL7A1-207ENST00000467985 MPHOSPH10O00566 681 aaKnown RBP22.94■■□□□ 1.26
COL7A1-207ENST00000467985 CYP2D6P10635 497 aa22.94■■□□□ 1.26
COL7A1-207ENST00000467985 USP17L24Q0WX57 530 aa22.94■■□□□ 1.26
COL7A1-207ENST00000467985 AAMPQ13685 434 aa22.94■■□□□ 1.26
COL7A1-207ENST00000467985 PUS7LQ9H0K6 701 aaKnown RBP22.94■■□□□ 1.26
COL7A1-207ENST00000467985 ZBTB47Q9UFB7 747 aaPredicted RBP22.94■■□□□ 1.26
COL7A1-207ENST00000467985 BAZ2AQ9UIF9 1905 aaKnown RBP22.93■■□□□ 1.26
COL7A1-207ENST00000467985 CCL5P13501 91 aa22.93■■□□□ 1.26
COL7A1-207ENST00000467985 SEPT2Q15019 361 aa22.93■■□□□ 1.26
COL7A1-207ENST00000467985 MTFR1Q15390 333 aa22.93■■□□□ 1.26
COL7A1-207ENST00000467985 ZYXQ15942 572 aaKnown RBP22.93■■□□□ 1.26
COL7A1-207ENST00000467985 C12orf60Q5U649 245 aa22.93■■□□□ 1.26
COL7A1-207ENST00000467985 TMEM179Q6ZVK1 233 aa22.93■■□□□ 1.26
COL7A1-207ENST00000467985 CRBNQ96SW2 442 aa22.93■■□□□ 1.26
COL7A1-207ENST00000467985 MYH8P13535 1937 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 USP17L12C9JPN9 530 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 USP17L21D6R901 530 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 RNF113AO15541 343 aaKnown RBP22.92■■□□□ 1.26
COL7A1-207ENST00000467985 GLRX3O76003 335 aaKnown RBP22.92■■□□□ 1.26
COL7A1-207ENST00000467985 CHGBP05060 677 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 GUCY1A2P33402 732 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 EVX2Q03828 476 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 TSHZ3Q63HK5 1081 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 ACER1Q8TDN7 264 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 CCDC17Q96LX7 622 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 RNF208Q9H0X6 261 aa22.92■■□□□ 1.26
COL7A1-207ENST00000467985 GJB1P08034 283 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 CAPN2P17655 700 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 VCAM1P19320 739 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 GIMAP6Q6P9H5 292 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 APPBP2Q92624 585 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 DYNLL2Q96FJ2 89 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 STRBPQ96SI9 672 aaKnown RBP22.91■■□□□ 1.26
COL7A1-207ENST00000467985 RBPJLQ9UBG7 517 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 ARPP21Q9UBL0 812 aaPredicted RBP22.91■■□□□ 1.26
COL7A1-207ENST00000467985 DOCK3Q8IZD9 2030 aa22.91■■□□□ 1.26
COL7A1-207ENST00000467985 ELNP15502 786 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 MAPK4P31152 587 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 ERVK-9P63128 1117 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 ERVK-24P63145 666 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 CATSPERGQ6ZRH7 1159 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 C16orf86Q6ZW13 317 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 CCAR1Q8IX12 1150 aaKnown RBP22.9■■□□□ 1.26
COL7A1-207ENST00000467985 SLC44A5Q8NCS7 719 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 GCC1Q96CN9 775 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 SH2D4AQ9H788 454 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 TXNRD2Q9NNW7 524 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 RABGAP1Q9Y3P9 1069 aa22.9■■□□□ 1.26
COL7A1-207ENST00000467985 INHAP05111 366 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 GNAT2P19087 354 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 MX1P20591 662 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 GJA8P48165 433 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 CDK8P49336 464 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 HDAC1Q13547 482 aaPredicted RBP22.89■■□□□ 1.25
COL7A1-207ENST00000467985 CTR9Q6PD62 1173 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 ARHGEF10LQ9HCE6 1279 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 GJD2Q9UKL4 321 aa22.89■■□□□ 1.25
COL7A1-207ENST00000467985 CCNA1P78396 465 aa22.88■■□□□ 1.25
COL7A1-207ENST00000467985 LBX2Q6XYB7 198 aa22.88■■□□□ 1.25
COL7A1-207ENST00000467985 PI4K2BQ8TCG2 481 aa22.88■■□□□ 1.25
COL7A1-207ENST00000467985 OSBP2Q969R2 916 aa22.88■■□□□ 1.25
COL7A1-207ENST00000467985 PAGR1Q9BTK6 254 aa22.88■■□□□ 1.25
COL7A1-207ENST00000467985 CYP2D7A0A087X1C5 515 aa22.87■■□□□ 1.25
COL7A1-207ENST00000467985 CENPBP07199 599 aaPredicted RBP22.87■■□□□ 1.25
COL7A1-207ENST00000467985 SBK1Q52WX2 424 aa22.87■■□□□ 1.25
COL7A1-207ENST00000467985 SOCS4Q8WXH5 440 aa22.87■■□□□ 1.25
COL7A1-207ENST00000467985 NUDT12Q9BQG2 462 aa22.87■■□□□ 1.25
COL7A1-207ENST00000467985 UNC93B1Q9H1C4 597 aa22.87■■□□□ 1.25
COL7A1-207ENST00000467985 RPAP3Q9H6T3 665 aaPredicted RBP22.87■■□□□ 1.25
COL7A1-207ENST00000467985 A0A1W2PRG0 241 aa22.86■■□□□ 1.25
COL7A1-207ENST00000467985 GSG1L2A8MUP6 293 aa22.86■■□□□ 1.25
COL7A1-207ENST00000467985 HMGCRP04035 888 aa22.86■■□□□ 1.25
COL7A1-207ENST00000467985 AKR1B1P15121 316 aa22.86■■□□□ 1.25
COL7A1-207ENST00000467985 ICA1Q05084 483 aa22.86■■□□□ 1.25
COL7A1-207ENST00000467985 ANKRD45Q5TZF3 282 aa22.86■■□□□ 1.25
COL7A1-207ENST00000467985 LPAR1Q92633 364 aa22.86■■□□□ 1.25
COL7A1-207ENST00000467985 GPAA1O43292 621 aa22.85■■□□□ 1.25
COL7A1-207ENST00000467985 XRCC5P13010 732 aaKnown RBP22.85■■□□□ 1.25
COL7A1-207ENST00000467985 Q3C1V9 767 aa22.85■■□□□ 1.25
COL7A1-207ENST00000467985 TRMT44Q8IYL2 757 aaKnown RBP22.85■■□□□ 1.25
COL7A1-207ENST00000467985 OTUD7AQ8TE49 926 aaPredicted RBP22.85■■□□□ 1.25
COL7A1-207ENST00000467985 U2AF1L4Q8WU68 220 aaKnown RBP22.85■■□□□ 1.25
COL7A1-207ENST00000467985 SHISA4Q96DD7 197 aa22.85■■□□□ 1.25
COL7A1-207ENST00000467985 FSD1Q9BTV5 496 aa22.85■■□□□ 1.25
COL7A1-207ENST00000467985 CWC22Q9HCG8 908 aaKnown RBP22.85■■□□□ 1.25
COL7A1-207ENST00000467985 HOXC10Q9NYD6 342 aa22.85■■□□□ 1.25
COL7A1-207ENST00000467985 TMX2Q9Y320 296 aa22.85■■□□□ 1.25
COL7A1-207ENST00000467985 COG2Q14746 738 aa22.84■■□□□ 1.25
COL7A1-207ENST00000467985 POTEEQ6S8J3 1075 aa22.84■■□□□ 1.25
COL7A1-207ENST00000467985 PLEKHH3Q7Z736 793 aa22.84■■□□□ 1.25
COL7A1-207ENST00000467985 KANSL2Q9H9L4 492 aa22.84■■□□□ 1.25
COL7A1-207ENST00000467985 SALL3Q9BXA9 1300 aa22.83■■□□□ 1.25
COL7A1-207ENST00000467985 CEP290O15078 2479 aa22.83■■□□□ 1.25
COL7A1-207ENST00000467985 PLXNB2O15031 1838 aa22.83■■□□□ 1.25
COL7A1-207ENST00000467985 SPDYE16A6NNV3 312 aaPredicted RBP22.83■■□□□ 1.25
COL7A1-207ENST00000467985 PEX10O60683 326 aa22.83■■□□□ 1.25
COL7A1-207ENST00000467985 SGPL1O95470 568 aa22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms