RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 APPP05067 770 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 CYP11A1P05108 521 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 PABPC1P11940 636 aaKnown RBP5.83□□□□□ -1.48
MSH2-205ENST00000467323 CD33P20138 364 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 CDC27P30260 824 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 PMS1P54277 932 aaKnown RBP5.83□□□□□ -1.48
MSH2-205ENST00000467323 PPP2R2AP63151 447 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 FAM182BQ5T319 152 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 ZFYVE27Q5T4F4 411 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 YOD1Q5VVQ6 348 aaPredicted RBP5.83□□□□□ -1.48
MSH2-205ENST00000467323 PKN3Q6P5Z2 889 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 LRFN4Q6PJG9 635 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 DGKHQ86XP1 1220 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 CACTIN-AS1Q8N1I8 211 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 MAGEB6Q8N7X4 407 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 SMARCC1Q92922 1105 aaPredicted RBP5.83□□□□□ -1.48
MSH2-205ENST00000467323 SCYL1Q96KG9 808 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 UBE2OQ9C0C9 1292 aaKnown RBP5.83□□□□□ -1.48
MSH2-205ENST00000467323 SOX17Q9H6I2 414 aaPredicted RBP5.83□□□□□ -1.48
MSH2-205ENST00000467323 NDFIP2Q9NV92 336 aa5.83□□□□□ -1.48
MSH2-205ENST00000467323 DNAJB12Q9NXW2 375 aaKnown RBP5.83□□□□□ -1.48
MSH2-205ENST00000467323 CCDC189A1A4V9 331 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 PRODHO43272 600 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 ZEB2O60315 1214 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 WDHD1O75717 1129 aaPredicted RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 PGRP06401 933 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 CENPBP07199 599 aaPredicted RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 SELPP16109 830 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 YARSP54577 528 aaKnown RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 GABREP78334 506 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 UBAP2LQ14157 1087 aaKnown RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 INPP5AQ14642 412 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 SYDE2Q5VT97 1194 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 HEATR6Q6AI08 1181 aaKnown RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 CXorf57Q6NSI4 855 aaKnown RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 LRRN4CLQ8ND94 238 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 PPP1R14AQ96A00 147 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 CORO1BQ9BR76 489 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 RTFDC1Q9BY42 306 aaPredicted RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 CCDC8Q9H0W5 538 aaPredicted RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 IFT22Q9H7X7 185 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 TRIM39Q9HCM9 518 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 AVENQ9NQS1 362 aaPredicted RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 CHST12Q9NRB3 414 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 GNL3LQ9NVN8 582 aaKnown RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 NDOR1Q9UHB4 597 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 TRHDEQ9UKU6 1024 aa5.82□□□□□ -1.48
MSH2-205ENST00000467323 ATXN7L1Q9ULK2 861 aaPredicted RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 NOB1Q9ULX3 412 aaKnown RBP5.82□□□□□ -1.48
MSH2-205ENST00000467323 DNAJA2O60884 412 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 THBS1P07996 1170 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 IGFALSP35858 605 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 ARL4DP49703 201 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 TMPRSS15P98073 1019 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 PURAQ00577 322 aaKnown RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 GSTM4Q03013 218 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 TBC1D8BQ0IIM8 1120 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 PCBP1Q15365 356 aaKnown RBP eCLIP5.81□□□□□ -1.48
MSH2-205ENST00000467323 LHFPL2Q6ZUX7 228 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 UBE2R2Q712K3 238 aaPredicted RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 CYFIP1Q7L576 1253 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 FAM35AQ86V20 835 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 ZNF227Q86WZ6 799 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 CNTD1Q8N815 330 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 OR2W6PQ8NHA6 318 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 PPM1EQ8WY54 764 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 ABHD17AQ96GS6 310 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 NAP1L4Q99733 375 aaKnown RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 ARPC5LQ9BPX5 153 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 ZC3H12CQ9C0D7 883 aaKnown RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 LACRTQ9GZZ8 138 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 LUC7LQ9NQ29 371 aaKnown RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 PRDM11Q9NQV5 511 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 SUCOQ9UBS9 1254 aaKnown RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 PHF24Q9UPV7 400 aa5.81□□□□□ -1.48
MSH2-205ENST00000467323 APOBEC2Q9Y235 224 aaKnown RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 TNPO3Q9Y5L0 923 aaKnown RBP5.81□□□□□ -1.48
MSH2-205ENST00000467323 FAM83GA6ND36 823 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 CHURC1-FNTBB4DL54 471 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 B4E1Z4 1266 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 H3BRJ5 948 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 NOP56O00567 594 aaKnown RBP5.8□□□□□ -1.48
MSH2-205ENST00000467323 SOX1O00570 391 aaPredicted RBP5.8□□□□□ -1.48
MSH2-205ENST00000467323 KPNA6O60684 536 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 ABLIM3O94929 683 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 FBXO21O94952 628 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 ITGAVP06756 1048 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 IFIT2P09913 472 aaKnown RBP5.8□□□□□ -1.48
MSH2-205ENST00000467323 CT47B1P0C2W7 299 aaPredicted RBP5.8□□□□□ -1.48
MSH2-205ENST00000467323 CPB1P15086 417 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 ZSCAN20P17040 1043 aaPredicted RBP5.8□□□□□ -1.48
MSH2-205ENST00000467323 PRR20EP86478 221 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 PRR20CP86479 221 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 PRR20DP86480 221 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 PRR20BP86481 221 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 PRR20AP86496 221 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 MORC3Q14149 939 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 POU4F3Q15319 338 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 CFAP100Q494V2 611 aa5.8□□□□□ -1.48
MSH2-205ENST00000467323 IFFO2Q5TF58 517 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms