RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 HMGCS2P54868 508 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 CTDSPL2Q05D32 466 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 PDE4BQ07343 736 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 DGKZQ13574 1117 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 FASTKD5Q7L8L6 764 aaKnown RBP13.14□□□□□ -0.31
MSH5-212ENST00000467319 SIAH1Q8IUQ4 282 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 STAG1Q8WVM7 1258 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 ZNF287Q9HBT7 754 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 CABP5Q9NP86 173 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 AGTPBP1Q9UPW5 1226 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 SLC45A1Q9Y2W3 748 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 HTTP42858 3142 aa13.14□□□□□ -0.31
MSH5-212ENST00000467319 A0A0G2JMZ2 1700 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 A0A1W2PRG0 241 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 USP17L10C9JJH3 530 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 MPHOSPH10O00566 681 aaKnown RBP13.13□□□□□ -0.31
MSH5-212ENST00000467319 PRDM1O75626 825 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 TRPA1O75762 1119 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 PTH1RQ03431 593 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 ICA1Q05084 483 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 CRHR2Q13324 411 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 TREML2Q5T2D2 321 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 ACER1Q8TDN7 264 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 R3HDMLQ9H3Y0 253 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 MKNK2Q9HBH9 465 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 NEDD4P46934 1319 aa13.13□□□□□ -0.31
MSH5-212ENST00000467319 PARP14Q460N5 1801 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 C19orf81C9J6K1 198 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 PDHXO00330 501 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 HAND2P61296 217 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 STK11IPQ8N1F8 1099 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 NEDD1Q8NHV4 660 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
MSH5-212ENST00000467319 KANSL2Q9H9L4 492 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
MSH5-212ENST00000467319 VCAM1P19320 739 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 NOVP48745 357 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 NT5C2P49902 561 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 TAF1CQ15572 869 aaPredicted RBP13.11□□□□□ -0.31
MSH5-212ENST00000467319 AKNAD1Q5T1N1 836 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 GADL1Q6ZQY3 521 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 NKX2-3Q8TAU0 364 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 MAP4K1Q92918 833 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 CEP95Q96GE4 821 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 FEZ1Q99689 392 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 INCENPQ9NQS7 918 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 PRDM10Q9NQV6 1147 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 CTNNA3Q9UI47 895 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 SYNPO2Q9UMS6 1093 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 U3KPZ7 1027 aaPredicted RBP13.11□□□□□ -0.31
MSH5-212ENST00000467319 RLFQ13129 1914 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 MYH4Q9Y623 1939 aa13.11□□□□□ -0.31
MSH5-212ENST00000467319 ZNF213O14771 459 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 EEF2P13639 858 aaKnown RBP13.1□□□□□ -0.31
MSH5-212ENST00000467319 HOXA7P31268 230 aaPredicted RBP13.1□□□□□ -0.31
MSH5-212ENST00000467319 LBX1P52954 281 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 USP14P54578 494 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 IMMTQ16891 758 aaKnown RBP13.1□□□□□ -0.31
MSH5-212ENST00000467319 USP17L2Q6R6M4 530 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 ZNF444Q8N0Y2 327 aaPredicted RBP13.1□□□□□ -0.31
MSH5-212ENST00000467319 PARK7Q99497 189 aaKnown RBP13.1□□□□□ -0.31
MSH5-212ENST00000467319 RNF41Q9H4P4 317 aaPredicted RBP13.1□□□□□ -0.31
MSH5-212ENST00000467319 ARHGEF10LQ9HCE6 1279 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 TMOD4Q9NZQ9 345 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 NYAP2Q9P242 653 aa13.1□□□□□ -0.31
MSH5-212ENST00000467319 GPR25O00155 361 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 TLR2O60603 784 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 CYP21A2P08686 494 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 TSPY3P0CV98 308 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 TSPY8P0CW00 308 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 FAM47AQ5JRC9 791 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 KIAA1755Q5JYT7 1200 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 CASC1Q6TDU7 716 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 LPAR1Q92633 364 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 SH2D4AQ9H788 454 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 VCPKMTQ9H867 229 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 ZFYVE28Q9HCC9 887 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 IL17RBQ9NRM6 502 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 RBM8AQ9Y5S9 174 aaKnown RBP13.09□□□□□ -0.31
MSH5-212ENST00000467319 TAF6LQ9Y6J9 622 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 ZSWIM8A7E2V4 1837 aa13.09□□□□□ -0.31
MSH5-212ENST00000467319 CYP2C8P10632 490 aa13.08□□□□□ -0.32
MSH5-212ENST00000467319 BCRP11274 1271 aa13.08□□□□□ -0.32
MSH5-212ENST00000467319 TFAP4Q01664 338 aa13.08□□□□□ -0.32
MSH5-212ENST00000467319 PABPC4Q13310 644 aaKnown RBP eCLIP13.08□□□□□ -0.32
MSH5-212ENST00000467319 ZYXQ15942 572 aaKnown RBP13.08□□□□□ -0.32
MSH5-212ENST00000467319 MFSD6Q6ZSS7 791 aa13.08□□□□□ -0.32
MSH5-212ENST00000467319 ASCC2Q9H1I8 757 aaPredicted RBP13.08□□□□□ -0.32
MSH5-212ENST00000467319 TCP11L1Q9NUJ3 509 aa13.08□□□□□ -0.32
MSH5-212ENST00000467319 PNMA3Q9UL41 463 aa13.08□□□□□ -0.32
MSH5-212ENST00000467319 TSPY2A6NKD2 308 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 RANBP6O60518 1105 aaKnown RBP13.07□□□□□ -0.32
MSH5-212ENST00000467319 NMT2O60551 498 aa13.07□□□□□ -0.32
MSH5-212ENST00000467319 TTLL1O95922 423 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms