RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 HMGCS2P54868 508 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 MTMR2Q13614 643 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 ZYXQ15942 572 aaKnown RBP16.48■□□□□ 0.23
UBA3-209ENST00000466763 IMMTQ16891 758 aaKnown RBP16.48■□□□□ 0.23
UBA3-209ENST00000466763 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 WDR18Q9BV38 432 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 ANO2Q9NQ90 1003 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 RNF186Q9NXI6 227 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 ANAPC4Q9UJX5 808 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 THSD7BQ9C0I4 1608 aa16.48■□□□□ 0.23
UBA3-209ENST00000466763 ZMYM6O95789 1325 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 TESPA1A2RU30 521 aaPredicted RBP16.47■□□□□ 0.23
UBA3-209ENST00000466763 USP17L10C9JJH3 530 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 HAX1O00165 279 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 PITPNM1O00562 1244 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 RANBP6O60518 1105 aaKnown RBP16.47■□□□□ 0.23
UBA3-209ENST00000466763 TSPY3P0CV98 308 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 TSPY8P0CW00 308 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 FASTKD5Q7L8L6 764 aaKnown RBP16.47■□□□□ 0.23
UBA3-209ENST00000466763 CLEC10AQ8IUN9 316 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 PTPN18Q99952 460 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 TMOD4Q9NZQ9 345 aa16.47■□□□□ 0.23
UBA3-209ENST00000466763 A0A0G2JLL6 359 aaPredicted RBP16.46■□□□□ 0.23
UBA3-209ENST00000466763 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 BTBD19C9JJ37 291 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 FOXN1O15353 648 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 TBC1D8O95759 1140 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 ALDH1A1P00352 501 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 BACE1P56817 501 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 TFAP4Q01664 338 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 ICA1Q05084 483 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 DGKZQ13574 1117 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 MFSD6Q6ZSS7 791 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 PRRT2Q7Z6L0 340 aaPredicted RBP16.46■□□□□ 0.23
UBA3-209ENST00000466763 FAM43AQ8N2R8 423 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 ACER1Q8TDN7 264 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 ARHGEF10LQ9HCE6 1279 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 CEP350Q5VT06 3117 aa16.46■□□□□ 0.23
UBA3-209ENST00000466763 C19orf81C9J6K1 198 aa16.45■□□□□ 0.22
UBA3-209ENST00000466763 CA12O43570 354 aa16.45■□□□□ 0.22
UBA3-209ENST00000466763 RAD21O60216 631 aa16.45■□□□□ 0.22
UBA3-209ENST00000466763 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
UBA3-209ENST00000466763 AKNAD1Q5T1N1 836 aa16.45■□□□□ 0.22
UBA3-209ENST00000466763 TBC1D10CQ8IV04 446 aa16.45■□□□□ 0.22
UBA3-209ENST00000466763 RNF41Q9H4P4 317 aaPredicted RBP16.45■□□□□ 0.22
UBA3-209ENST00000466763 KANSL2Q9H9L4 492 aa16.45■□□□□ 0.22
UBA3-209ENST00000466763 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.45■□□□□ 0.22
UBA3-209ENST00000466763 RBM8AQ9Y5S9 174 aaKnown RBP16.45■□□□□ 0.22
UBA3-209ENST00000466763 TACC3Q9Y6A5 838 aa16.45■□□□□ 0.22
UBA3-209ENST00000466763 PDHXO00330 501 aa16.44■□□□□ 0.22
UBA3-209ENST00000466763 USP17L2Q6R6M4 530 aa16.44■□□□□ 0.22
UBA3-209ENST00000466763 ANKRD23Q86SG2 305 aa16.44■□□□□ 0.22
UBA3-209ENST00000466763 MAP4K1Q92918 833 aa16.44■□□□□ 0.22
UBA3-209ENST00000466763 LSG1Q9H089 658 aaKnown RBP16.44■□□□□ 0.22
UBA3-209ENST00000466763 NBPF3Q9H094 633 aa16.44■□□□□ 0.22
UBA3-209ENST00000466763 PTPRFP10586 1907 aa16.44■□□□□ 0.22
UBA3-209ENST00000466763 ORC4O43929 436 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 EEF2P13639 858 aaKnown RBP16.43■□□□□ 0.22
UBA3-209ENST00000466763 CTCFP49711 727 aaPredicted RBP16.43■□□□□ 0.22
UBA3-209ENST00000466763 USP14P54578 494 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 MOGSQ13724 837 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 TREML2Q5T2D2 321 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 GPAT2Q6NUI2 795 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 NEDD1Q8NHV4 660 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 STAG1Q8WVM7 1258 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 SH2D4AQ9H788 454 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 ZFYVE28Q9HCC9 887 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 SAGE1Q9NXZ1 904 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 CLIP2Q9UDT6 1046 aa16.43■□□□□ 0.22
UBA3-209ENST00000466763 A0A1W2PRG0 241 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 LBX1P52954 281 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 CRHR2Q13324 411 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 SH3D19Q5HYK7 790 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 PROCA1Q8NCQ7 364 aaPredicted RBP16.42■□□□□ 0.22
UBA3-209ENST00000466763 CEP95Q96GE4 821 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.42■□□□□ 0.22
UBA3-209ENST00000466763 KIAA1683Q9H0B3 1180 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 EMILIN3Q9NT22 766 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 AGTPBP1Q9UPW5 1226 aa16.42■□□□□ 0.22
UBA3-209ENST00000466763 LAMA4Q16363 1823 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 B4E1Z4 1266 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 CYP21A2P08686 494 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 HSPA8P11142 646 aaKnown RBP16.41■□□□□ 0.22
UBA3-209ENST00000466763 PCP11498 1178 aaKnown RBP16.41■□□□□ 0.22
UBA3-209ENST00000466763 TRDNQ13061 729 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 PABPC4Q13310 644 aaKnown RBP eCLIP16.41■□□□□ 0.22
UBA3-209ENST00000466763 SIAH1Q8IUQ4 282 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 ESR2Q92731 530 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 R3HDMLQ9H3Y0 253 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 NEDD4P46934 1319 aa16.41■□□□□ 0.22
UBA3-209ENST00000466763 NMT2O60551 498 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 KDM4AO75164 1064 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 FGRP09769 529 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 CYP2C8P10632 490 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 OSBPP22059 807 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 IRX3P78415 501 aaPredicted RBP16.4■□□□□ 0.22
UBA3-209ENST00000466763 SPICE1Q8N0Z3 855 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 CHMP4CQ96CF2 233 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 KRT23Q9C075 422 aa16.4■□□□□ 0.22
UBA3-209ENST00000466763 CNNM2Q9H8M5 875 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms