RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 NBPF9Q3BBW0 867 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 TBC1D10BQ4KMP7 808 aaPredicted RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 NECAB1Q8N987 351 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 USP40Q9NVE5 1235 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 MKRN1Q9UHC7 482 aaKnown RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 MYH2Q9UKX2 1941 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 GSG1L2A8MUP6 293 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 HSPD1P10809 573 aaKnown RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 LMOD1P29536 600 aaPredicted RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 HIRAP54198 1017 aaPredicted RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 PTH1RQ03431 593 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 KIF4BQ2VIQ3 1234 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 LARP1BQ659C4 914 aaKnown RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 TRPM4Q8TD43 1214 aa17.73■□□□□ 0.43
SNED1-208ENST00000466618 TDRD3Q9H7E2 651 aaKnown RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 ADARB2Q9NS39 739 aaKnown RBP17.73■□□□□ 0.43
SNED1-208ENST00000466618 PATL2C9JE40 543 aaKnown RBP17.72■□□□□ 0.43
SNED1-208ENST00000466618 WDHD1O75717 1129 aaPredicted RBP17.72■□□□□ 0.43
SNED1-208ENST00000466618 ZRANB2O95218 330 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNED1-208ENST00000466618 LEO1Q8WVC0 666 aaPredicted RBP17.72■□□□□ 0.43
SNED1-208ENST00000466618 DSCC1Q9BVC3 393 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 CRNKL1Q9BZJ0 848 aaKnown RBP17.72■□□□□ 0.43
SNED1-208ENST00000466618 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 HACL1Q9UJ83 578 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 SLC4A4Q9Y6R1 1079 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 WDR90Q96KV7 1748 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 SPDYE2Q495Y8 402 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 C11orf57Q6ZUT1 292 aaPredicted RBP17.72■□□□□ 0.43
SNED1-208ENST00000466618 NEK11Q8NG66 645 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 MAP4K1Q92918 833 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 PGBD1Q96JS3 809 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 SPATA32Q96LK8 384 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 JAKMIP1Q96N16 626 aaKnown RBP17.72■□□□□ 0.43
SNED1-208ENST00000466618 IDI2Q9BXS1 227 aa17.72■□□□□ 0.43
SNED1-208ENST00000466618 SCAND2PQ9GZW5 306 aaPredicted RBP17.72■□□□□ 0.43
SNED1-208ENST00000466618 KIF2AO00139 706 aaPredicted RBP17.71■□□□□ 0.43
SNED1-208ENST00000466618 MUM1L1Q5H9M0 696 aa17.71■□□□□ 0.43
SNED1-208ENST00000466618 RBM26Q5T8P6 1007 aaKnown RBP17.71■□□□□ 0.43
SNED1-208ENST00000466618 TEX11Q8IYF3 940 aa17.71■□□□□ 0.43
SNED1-208ENST00000466618 SDR42E1Q8WUS8 393 aa17.71■□□□□ 0.43
SNED1-208ENST00000466618 EPB41L4AQ9HCS5 686 aaPredicted RBP17.71■□□□□ 0.43
SNED1-208ENST00000466618 ZNF70Q9UC06 446 aaPredicted RBP17.71■□□□□ 0.43
SNED1-208ENST00000466618 IQCA1LA6NCM1 817 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 CAVIN2O95810 425 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 ATP8A2Q9NTI2 1148 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 TFIP11Q9UBB9 837 aaKnown RBP17.7■□□□□ 0.42
SNED1-208ENST00000466618 GOLGA6L4A6NEF3 574 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 NPM3O75607 178 aaKnown RBP17.7■□□□□ 0.42
SNED1-208ENST00000466618 NFIAQ12857 509 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 ALX1Q15699 326 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 TGFBRAP1Q8WUH2 860 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 KCNB2Q92953 911 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 TM6SF1Q9BZW5 370 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 TAF1DQ9H5J8 278 aaPredicted RBP17.7■□□□□ 0.42
SNED1-208ENST00000466618 DCP1AQ9NPI6 582 aaPredicted RBP17.7■□□□□ 0.42
SNED1-208ENST00000466618 DDX4Q9NQI0 724 aaKnown RBP17.7■□□□□ 0.42
SNED1-208ENST00000466618 TPCN1Q9ULQ1 816 aa17.7■□□□□ 0.42
SNED1-208ENST00000466618 EPHX2P34913 555 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 IRX3P78415 501 aaPredicted RBP17.69■□□□□ 0.42
SNED1-208ENST00000466618 USP50Q70EL3 339 aaPredicted RBP17.69■□□□□ 0.42
SNED1-208ENST00000466618 IFNL3Q8IZI9 196 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 FAM198AQ9UFP1 575 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
SNED1-208ENST00000466618 GOLGA6L19H0YKK7 550 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 FGAP02671 866 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 CACNB3P54284 484 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 FKBP1CQ5VVH2 108 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 FILIP1Q7Z7B0 1213 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 CYP46A1Q9Y6A2 500 aa17.69■□□□□ 0.42
SNED1-208ENST00000466618 ZMYM6O95789 1325 aa17.68■□□□□ 0.42
SNED1-208ENST00000466618 FLT1P17948 1338 aa17.68■□□□□ 0.42
SNED1-208ENST00000466618 CLRN2A0PK11 232 aa17.68■□□□□ 0.42
SNED1-208ENST00000466618 MYO1BO43795 1136 aa17.68■□□□□ 0.42
SNED1-208ENST00000466618 SNW1Q13573 536 aaKnown RBP17.68■□□□□ 0.42
SNED1-208ENST00000466618 UBXN6Q9BZV1 441 aa17.68■□□□□ 0.42
SNED1-208ENST00000466618 USP5P45974 858 aa17.67■□□□□ 0.42
SNED1-208ENST00000466618 ARHGAP29Q52LW3 1261 aa17.67■□□□□ 0.42
SNED1-208ENST00000466618 E4F1Q66K89 784 aaPredicted RBP17.67■□□□□ 0.42
SNED1-208ENST00000466618 TXLNBQ8N3L3 684 aa17.67■□□□□ 0.42
SNED1-208ENST00000466618 SYT10Q6XYQ8 523 aa17.67■□□□□ 0.42
SNED1-208ENST00000466618 MAPKAPK5Q8IW41 473 aa17.67■□□□□ 0.42
SNED1-208ENST00000466618 BICD2Q8TD16 824 aa17.67■□□□□ 0.42
SNED1-208ENST00000466618 PGAP2Q9UHJ9 254 aa17.67■□□□□ 0.42
SNED1-208ENST00000466618 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.67■□□□□ 0.42
SNED1-208ENST00000466618 ENTPD3O75355 529 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 APPP05067 770 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 NECTIN1Q15223 517 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 DHX40Q8IX18 779 aaKnown RBP17.66■□□□□ 0.42
SNED1-208ENST00000466618 SMARCE1Q969G3 411 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 PPP1R13BQ96KQ4 1090 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 NACAP1Q9BZK3 213 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 EFCC1Q9HA90 598 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 CNTNAP1P78357 1384 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 SCN4AP35499 1836 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 POLR3GO15318 223 aaPredicted RBP17.66■□□□□ 0.42
SNED1-208ENST00000466618 VEGFAP15692 232 aaPredicted RBP17.66■□□□□ 0.42
SNED1-208ENST00000466618 COL9A3Q14050 684 aaPredicted RBP17.66■□□□□ 0.42
SNED1-208ENST00000466618 TEX35Q5T0J7 233 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 ZFPM1Q8IX07 1006 aa17.66■□□□□ 0.42
SNED1-208ENST00000466618 OSBPL5Q9H0X9 879 aaPredicted RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms