RNA–Protein interactions for RNA: ENST00000466606.1

EDEM3-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 3

Gene EDEM3, Length 487 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-205ENST00000466606 TMEM40Q8WWA1 233 aa6.72□□□□□ -1.33
EDEM3-205ENST00000466606 CCDC74BQ96LY2 380 aa6.72□□□□□ -1.33
EDEM3-205ENST00000466606 TINF2Q9BSI4 451 aa6.72□□□□□ -1.33
EDEM3-205ENST00000466606 CEP131Q9UPN4 1083 aa6.72□□□□□ -1.33
EDEM3-205ENST00000466606 GBP1P32455 592 aa6.71□□□□□ -1.34
EDEM3-205ENST00000466606 CD97P48960 835 aa6.71□□□□□ -1.34
EDEM3-205ENST00000466606 SFRP5Q5T4F7 317 aa6.71□□□□□ -1.34
EDEM3-205ENST00000466606 NLRC3Q7RTR2 1065 aa6.71□□□□□ -1.34
EDEM3-205ENST00000466606 CPLX3Q8WVH0 158 aa6.71□□□□□ -1.34
EDEM3-205ENST00000466606 CNNM2Q9H8M5 875 aa6.71□□□□□ -1.34
EDEM3-205ENST00000466606 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
EDEM3-205ENST00000466606 HYAL3O43820 417 aaPredicted RBP6.7□□□□□ -1.34
EDEM3-205ENST00000466606 LRRN2O75325 713 aa6.7□□□□□ -1.34
EDEM3-205ENST00000466606 UBOX5O94941 541 aa6.7□□□□□ -1.34
EDEM3-205ENST00000466606 NME1P15531 152 aaKnown RBP6.7□□□□□ -1.34
EDEM3-205ENST00000466606 ATF4P18848 351 aaPredicted RBP6.7□□□□□ -1.34
EDEM3-205ENST00000466606 MSMPQ1L6U9 139 aa6.7□□□□□ -1.34
EDEM3-205ENST00000466606 LRRFIP1Q32MZ4 808 aaKnown RBP6.7□□□□□ -1.34
EDEM3-205ENST00000466606 INTS5Q6P9B9 1019 aaKnown RBP6.7□□□□□ -1.34
EDEM3-205ENST00000466606 SLC9A7Q96T83 725 aa6.7□□□□□ -1.34
EDEM3-205ENST00000466606 SRRTQ9BXP5 876 aaKnown RBP6.7□□□□□ -1.34
EDEM3-205ENST00000466606 PCMTD2Q9NV79 361 aa6.7□□□□□ -1.34
EDEM3-205ENST00000466606 MEIS3P2A8K0S8 358 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 RGS13O14921 159 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 CEACAM5P06731 702 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 IMPDH2P12268 514 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 DNAJA1P31689 397 aaKnown RBP6.69□□□□□ -1.34
EDEM3-205ENST00000466606 ETV3P41162 512 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 EIF6P56537 245 aaKnown RBP6.69□□□□□ -1.34
EDEM3-205ENST00000466606 GNL2Q13823 731 aaKnown RBP6.69□□□□□ -1.34
EDEM3-205ENST00000466606 COL9A2Q14055 689 aaPredicted RBP6.69□□□□□ -1.34
EDEM3-205ENST00000466606 CDKAL1Q5VV42 579 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 CDCP2Q5VXM1 449 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 LSRQ86X29 649 aaPredicted RBP6.69□□□□□ -1.34
EDEM3-205ENST00000466606 NETO1Q8TDF5 533 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 SEC16BQ96JE7 1060 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 ZNF512BQ96KM6 892 aaPredicted RBP6.69□□□□□ -1.34
EDEM3-205ENST00000466606 SPATA32Q96LK8 384 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 KREMEN1Q96MU8 473 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 CRBNQ96SW2 442 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 MAPK8IP1Q9UQF2 711 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 MRVI1Q9Y6F6 885 aa6.69□□□□□ -1.34
EDEM3-205ENST00000466606 FAM155AB1AL88 458 aaPredicted RBP6.68□□□□□ -1.34
EDEM3-205ENST00000466606 IGF2BP3O00425 579 aaKnown RBP eCLIP6.68□□□□□ -1.34
EDEM3-205ENST00000466606 ADAMTS4O75173 837 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 ACRP10323 421 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 SPINK2P20155 84 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 CD96P40200 585 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 CHMP4BP1P59074 171 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 BNIP3Q12983 259 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 LRP8Q14114 963 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 ZYXQ15942 572 aaKnown RBP6.68□□□□□ -1.34
EDEM3-205ENST00000466606 NKPD1Q17RQ9 610 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 NAALADL2Q58DX5 795 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 ZNF746Q6NUN9 644 aaPredicted RBP6.68□□□□□ -1.34
EDEM3-205ENST00000466606 VPS37DQ86XT2 251 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 SPACA3Q8IXA5 215 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 ANAPC16Q96DE5 110 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 Q96M66 194 aa6.68□□□□□ -1.34
EDEM3-205ENST00000466606 CYP7A1P22680 504 aa6.67□□□□□ -1.34
EDEM3-205ENST00000466606 ZC3H6P61129 1189 aaKnown RBP6.67□□□□□ -1.34
EDEM3-205ENST00000466606 TNK2Q07912 1038 aa6.67□□□□□ -1.34
EDEM3-205ENST00000466606 DTX1Q86Y01 620 aa6.67□□□□□ -1.34
EDEM3-205ENST00000466606 TMEM192Q8IY95 271 aa6.67□□□□□ -1.34
EDEM3-205ENST00000466606 MFSD4AQ8N468 514 aa6.67□□□□□ -1.34
EDEM3-205ENST00000466606 SHDQ96IW2 340 aa6.67□□□□□ -1.34
EDEM3-205ENST00000466606 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.67□□□□□ -1.34
EDEM3-205ENST00000466606 CAPN6Q9Y6Q1 641 aa6.67□□□□□ -1.34
EDEM3-205ENST00000466606 CECR2Q9BXF3 1484 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 COL17A1Q9UMD9 1497 aaPredicted RBP6.66□□□□□ -1.34
EDEM3-205ENST00000466606 KIAA1324LA8MWY0 1029 aaPredicted RBP6.66□□□□□ -1.34
EDEM3-205ENST00000466606 TNFRSF10CO14798 259 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 SSBP05455 408 aaKnown RBP eCLIP6.66□□□□□ -1.34
EDEM3-205ENST00000466606 GIPRP48546 466 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 ARID5AQ03989 594 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 IFI16Q16666 785 aaKnown RBP6.66□□□□□ -1.34
EDEM3-205ENST00000466606 ARTNQ5T4W7 220 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 ZNF574Q6ZN55 896 aaPredicted RBP6.66□□□□□ -1.34
EDEM3-205ENST00000466606 FAM169BQ8N8A8 192 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 RBBP8NLQ8NC74 664 aaPredicted RBP6.66□□□□□ -1.34
EDEM3-205ENST00000466606 HSPA12BQ96MM6 686 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 FAM86C1Q9NVL1 165 aa6.66□□□□□ -1.34
EDEM3-205ENST00000466606 BSDC1Q9NW68 430 aaPredicted RBP6.66□□□□□ -1.34
EDEM3-205ENST00000466606 WASH4PA8MWX3 477 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 H3BS24 57 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 ZNF865P0CJ78 1059 aaPredicted RBP6.65□□□□□ -1.34
EDEM3-205ENST00000466606 GUCY2CP25092 1073 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 PPP2R5EQ16537 467 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 AOC3Q16853 763 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 UNC5AQ6ZN44 842 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 RNF141Q8WVD5 230 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 SLC6A18Q96N87 628 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 TM9SF2Q99805 663 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 TNKS2Q9H2K2 1166 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 MKNK2Q9HBH9 465 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 ZFP64Q9NPA5 681 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 CCDC39Q9UFE4 941 aa6.65□□□□□ -1.34
EDEM3-205ENST00000466606 TMEM265A0A087WTH1 108 aa6.64□□□□□ -1.35
EDEM3-205ENST00000466606 CLEC3AO75596 197 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms