RNA–Protein interactions for RNA: ENST00000465934.1

CACNA1C-224, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-224ENST00000465934 CABP5Q9NP86 173 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 ATP8A2Q9NTI2 1148 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 RBPJLQ9UBG7 517 aa16.94■□□□□ 0.3
CACNA1C-224ENST00000465934 A0A1W2PRG0 241 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L12C9JPN9 530 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L21D6R901 530 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 INHAP05111 366 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 VCAM1P19320 739 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 KBTBD3Q8NAB2 608 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 PAGR1Q9BTK6 254 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 RNF208Q9H0X6 261 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 SLC4A4Q9Y6R1 1079 aa16.93■□□□□ 0.3
CACNA1C-224ENST00000465934 AKR1B1P15121 316 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 UBXN2AP68543 259 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 Q3C1V9 767 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 C12orf60Q5U649 245 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 GPRC5AQ8NFJ5 357 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 PXYLP1Q8TE99 480 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 OSBP2Q969R2 916 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 PORCNQ9H237 461 aa16.92■□□□□ 0.3
CACNA1C-224ENST00000465934 MGAMO43451 1857 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L15C9J2P7 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L13C9JLJ4 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L11C9JVI0 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L18D6R9N7 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L22D6RA61 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L17D6RBQ6 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L19D6RCP7 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L20D6RJB6 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 GJB1P08034 283 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP14P54578 494 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 ERVK-9P63128 1117 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 ERVK-24P63145 666 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 USP17L24Q0WX57 530 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 KIAA1755Q5JYT7 1200 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 CTR9Q6PD62 1173 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 PI4K2BQ8TCG2 481 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 STRBPQ96SI9 672 aaKnown RBP16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 SWAP70Q9UH65 585 aa16.91■□□□□ 0.3
CACNA1C-224ENST00000465934 CNMDO75829 334 aa16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 GJA8P48165 433 aa16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 CDK8P49336 464 aa16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 TRIM32Q13049 653 aa16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 CATSPERGQ6ZRH7 1159 aa16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 TMEM179Q6ZVK1 233 aa16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 SIAH1Q8IUQ4 282 aa16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 RPAP3Q9H6T3 665 aaPredicted RBP16.9■□□□□ 0.3
CACNA1C-224ENST00000465934 M0R2C6 588 aa16.89■□□□□ 0.29
CACNA1C-224ENST00000465934 RNF113AO15541 343 aaKnown RBP16.89■□□□□ 0.29
CACNA1C-224ENST00000465934 C16orf86Q6ZW13 317 aa16.89■□□□□ 0.29
CACNA1C-224ENST00000465934 U2AF1L4Q8WU68 220 aaKnown RBP16.89■□□□□ 0.29
CACNA1C-224ENST00000465934 APPBP2Q92624 585 aa16.89■□□□□ 0.29
CACNA1C-224ENST00000465934 GSG1L2A8MUP6 293 aa16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 CYP2B6P20813 491 aa16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 UBE2Q1Q7Z7E8 422 aa16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 STK11IPQ8N1F8 1099 aa16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 DDRGK1Q96HY6 314 aa16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 EPB41L4AQ9HCS5 686 aaPredicted RBP16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 BTBD7Q9P203 1132 aa16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 TTC41PQ6P2S7 1318 aa16.88■□□□□ 0.29
CACNA1C-224ENST00000465934 SPDYE16A6NNV3 312 aaPredicted RBP16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 GPAA1O43292 621 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 MX1P20591 662 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 MAPK4P31152 587 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 ICA1Q05084 483 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 GPR142Q7Z601 462 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 SPICE1Q8N0Z3 855 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 NKX2-3Q8TAU0 364 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 GTF3C2Q8WUA4 911 aaPredicted RBP16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 TRIB2Q92519 343 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 DEFB118Q96PH6 123 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 PAK6Q9NQU5 681 aaPredicted RBP16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 RABGAP1Q9Y3P9 1069 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 SALL3Q9BXA9 1300 aa16.87■□□□□ 0.29
CACNA1C-224ENST00000465934 GLRX3O76003 335 aaKnown RBP16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 SGPL1O95470 568 aa16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 HMGCRP04035 888 aa16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 ANKRD45Q5TZF3 282 aa16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 NUDT12Q9BQG2 462 aa16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 TANGO6Q9C0B7 1094 aa16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
CACNA1C-224ENST00000465934 ERC2O15083 957 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 ZFYP08048 801 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 HDAC1Q13547 482 aaPredicted RBP16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 CCL14Q16627 93 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 MORN1Q5T089 497 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 LBX2Q6XYB7 198 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 PLEKHH3Q7Z736 793 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 CCAR1Q8IX12 1150 aaKnown RBP16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 SOCS4Q8WXH5 440 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 USP6NLQ92738 828 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 CCDC17Q96LX7 622 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 FSD1Q9BTV5 496 aa16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNA1C-224ENST00000465934 TMX2Q9Y320 296 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms