RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 SKAP1Q86WV1 359 aa30.92■■■□□ 2.54
SMC4-206ENST00000465903 SIAH1Q8IUQ4 282 aa30.92■■■□□ 2.54
SMC4-206ENST00000465903 PARK7Q99497 189 aaKnown RBP30.92■■■□□ 2.54
SMC4-206ENST00000465903 CCDC171Q6TFL3 1326 aa30.92■■■□□ 2.54
SMC4-206ENST00000465903 ZSWIM8A7E2V4 1837 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 HIP1O00291 1037 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 HSPD1P10809 573 aaKnown RBP30.91■■■□□ 2.54
SMC4-206ENST00000465903 RASA1P20936 1047 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 PPARAQ07869 468 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 USP17L2Q6R6M4 530 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 CCDC136Q96JN2 1154 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 MCOLN1Q9GZU1 580 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 DIAPH3Q9NSV4 1193 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 TMOD4Q9NZQ9 345 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 CPA4Q9UI42 421 aa30.91■■■□□ 2.54
SMC4-206ENST00000465903 A0A1W2PRG0 241 aa30.9■■■□□ 2.54
SMC4-206ENST00000465903 CD99L2Q8TCZ2 262 aa30.9■■■□□ 2.54
SMC4-206ENST00000465903 KIAA1683Q9H0B3 1180 aa30.9■■■□□ 2.54
SMC4-206ENST00000465903 FGAP02671 866 aa30.89■■■□□ 2.54
SMC4-206ENST00000465903 CLEC10AQ8IUN9 316 aa30.89■■■□□ 2.54
SMC4-206ENST00000465903 ERO1AQ96HE7 468 aa30.89■■■□□ 2.54
SMC4-206ENST00000465903 C12orf42Q96LP6 360 aa30.89■■■□□ 2.54
SMC4-206ENST00000465903 GNL3Q9BVP2 549 aaKnown RBP eCLIP30.89■■■□□ 2.54
SMC4-206ENST00000465903 MKNK2Q9HBH9 465 aa30.89■■■□□ 2.54
SMC4-206ENST00000465903 MGAMO43451 1857 aa30.87■■■□□ 2.53
SMC4-206ENST00000465903 BCRP11274 1271 aa30.87■■■□□ 2.53
SMC4-206ENST00000465903 HOXA7P31268 230 aaPredicted RBP30.87■■■□□ 2.53
SMC4-206ENST00000465903 ZYXQ15942 572 aaKnown RBP30.87■■■□□ 2.53
SMC4-206ENST00000465903 FEZ1Q99689 392 aa30.87■■■□□ 2.53
SMC4-206ENST00000465903 IL25Q9H293 177 aa30.87■■■□□ 2.53
SMC4-206ENST00000465903 TACC3Q9Y6A5 838 aa30.87■■■□□ 2.53
SMC4-206ENST00000465903 PRDM1O75626 825 aa30.86■■■□□ 2.53
SMC4-206ENST00000465903 USP14P54578 494 aa30.86■■■□□ 2.53
SMC4-206ENST00000465903 CTDSPL2Q05D32 466 aa30.86■■■□□ 2.53
SMC4-206ENST00000465903 PABPC4Q13310 644 aaKnown RBP eCLIP30.86■■■□□ 2.53
SMC4-206ENST00000465903 ASCC2Q9H1I8 757 aaPredicted RBP30.86■■■□□ 2.53
SMC4-206ENST00000465903 ANAPC4Q9UJX5 808 aa30.86■■■□□ 2.53
SMC4-206ENST00000465903 MFAP1P55081 439 aaKnown RBP30.85■■■□□ 2.53
SMC4-206ENST00000465903 PNMA3Q9UL41 463 aa30.85■■■□□ 2.53
SMC4-206ENST00000465903 MYH4Q9Y623 1939 aa30.85■■■□□ 2.53
SMC4-206ENST00000465903 ZMYM6O95789 1325 aa30.84■■■□□ 2.53
SMC4-206ENST00000465903 OSBPP22059 807 aa30.84■■■□□ 2.53
SMC4-206ENST00000465903 LACTBP83111 547 aaPredicted RBP30.84■■■□□ 2.53
SMC4-206ENST00000465903 ICA1Q05084 483 aa30.84■■■□□ 2.53
SMC4-206ENST00000465903 ZNF444Q8N0Y2 327 aaPredicted RBP30.84■■■□□ 2.53
SMC4-206ENST00000465903 INCENPQ9NQS7 918 aa30.84■■■□□ 2.53
SMC4-206ENST00000465903 DDX52Q9Y2R4 599 aaKnown RBP eCLIP30.84■■■□□ 2.53
SMC4-206ENST00000465903 DOCK3Q8IZD9 2030 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 SLC3A2P08195 630 aaKnown RBP30.83■■■□□ 2.53
SMC4-206ENST00000465903 CHMLP26374 656 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 CTGFP29279 349 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 KIAA1755Q5JYT7 1200 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 OTOP1Q7RTM1 612 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 P2RX7Q99572 595 aaKnown RBP30.83■■■□□ 2.53
SMC4-206ENST00000465903 ARHGAP39Q9C0H5 1083 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 KANSL2Q9H9L4 492 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 ZNF287Q9HBT7 754 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 TMX2Q9Y320 296 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 TRIM17Q9Y577 477 aa30.83■■■□□ 2.53
SMC4-206ENST00000465903 EEF2P13639 858 aaKnown RBP30.82■■■□□ 2.52
SMC4-206ENST00000465903 PDE4BQ07343 736 aa30.82■■■□□ 2.52
SMC4-206ENST00000465903 SMCR8Q8TEV9 937 aaPredicted RBP30.82■■■□□ 2.52
SMC4-206ENST00000465903 IGKV6D-41A0A0C4DH26 115 aa30.81■■■□□ 2.52
SMC4-206ENST00000465903 ARHGEF10LQ9HCE6 1279 aa30.81■■■□□ 2.52
SMC4-206ENST00000465903 RLFQ13129 1914 aa30.81■■■□□ 2.52
SMC4-206ENST00000465903 FGRP09769 529 aa30.8■■■□□ 2.52
SMC4-206ENST00000465903 VCAM1P19320 739 aa30.8■■■□□ 2.52
SMC4-206ENST00000465903 PKN2Q16513 984 aaKnown RBP30.8■■■□□ 2.52
SMC4-206ENST00000465903 ABHD8Q96I13 439 aa30.8■■■□□ 2.52
SMC4-206ENST00000465903 EFCC1Q9HA90 598 aa30.8■■■□□ 2.52
SMC4-206ENST00000465903 LAMA4Q16363 1823 aa30.8■■■□□ 2.52
SMC4-206ENST00000465903 USP17L15C9J2P7 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L13C9JLJ4 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L11C9JVI0 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L18D6R9N7 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L22D6RA61 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L17D6RBQ6 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L19D6RCP7 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L20D6RJB6 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 IRX3P78415 501 aaPredicted RBP30.79■■■□□ 2.52
SMC4-206ENST00000465903 USP17L24Q0WX57 530 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 FAM47AQ5JRC9 791 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 CATSPERGQ6ZRH7 1159 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 ANKRD13CQ8N6S4 541 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 NEDD1Q8NHV4 660 aa30.79■■■□□ 2.52
SMC4-206ENST00000465903 GCLCP48506 637 aaPredicted RBP30.78■■■□□ 2.52
SMC4-206ENST00000465903 POTEEQ6S8J3 1075 aa30.78■■■□□ 2.52
SMC4-206ENST00000465903 DSCC1Q9BVC3 393 aa30.78■■■□□ 2.52
SMC4-206ENST00000465903 NBPF3Q9H094 633 aa30.78■■■□□ 2.52
SMC4-206ENST00000465903 PARP14Q460N5 1801 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 ECM2O94769 699 aaPredicted RBP30.77■■■□□ 2.52
SMC4-206ENST00000465903 HAND2P61296 217 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 TFAP4Q01664 338 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 ATP2B2Q01814 1243 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 KIF22Q14807 665 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 ERICH6BQ5W0A0 696 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 FBXO46Q6PJ61 603 aaPredicted RBP30.77■■■□□ 2.52
SMC4-206ENST00000465903 VCPKMTQ9H867 229 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 NYAP2Q9P242 653 aa30.77■■■□□ 2.52
SMC4-206ENST00000465903 PLIN4Q96Q06 1357 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms