RNA–Protein interactions for RNA: ENST00000464586.1

PLD3-208, Transcript of phospholipase D family member 3, humanhuman

TSL 1 (best)

Gene PLD3, Length 253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLD3-208ENST00000464586 FOXN1O15353 648 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 GUCY1A2P33402 732 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 USP14P54578 494 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 BACE1P56817 501 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 PABPC4Q13310 644 aaKnown RBP eCLIP9.8□□□□□ -0.84
PLD3-208ENST00000464586 TAF1CQ15572 869 aaPredicted RBP9.8□□□□□ -0.84
PLD3-208ENST00000464586 IMMTQ16891 758 aaKnown RBP9.8□□□□□ -0.84
PLD3-208ENST00000464586 SHROOM1Q2M3G4 852 aaPredicted RBP9.8□□□□□ -0.84
PLD3-208ENST00000464586 USP17L2Q6R6M4 530 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 PROCA1Q8NCQ7 364 aaPredicted RBP9.8□□□□□ -0.84
PLD3-208ENST00000464586 ESYT1Q9BSJ8 1104 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 CFHR5Q9BXR6 569 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 IL25Q9H293 177 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 RNF41Q9H4P4 317 aaPredicted RBP9.8□□□□□ -0.84
PLD3-208ENST00000464586 SH2D4AQ9H788 454 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 KANSL2Q9H9L4 492 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 ZFYVE28Q9HCC9 887 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 TOMM22Q9NS69 142 aa9.8□□□□□ -0.84
PLD3-208ENST00000464586 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.8□□□□□ -0.84
PLD3-208ENST00000464586 U3KPZ7 1027 aaPredicted RBP9.8□□□□□ -0.84
PLD3-208ENST00000464586 PDHXO00330 501 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 ORC4O43929 436 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 PRDM1O75626 825 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 TBC1D8O95759 1140 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 FGRP09769 529 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 TSPY3P0CV98 308 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 TSPY8P0CW00 308 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 HSPA8P11142 646 aaKnown RBP9.79□□□□□ -0.84
PLD3-208ENST00000464586 NT5C2P49902 561 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 HMGCS2P54868 508 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 HAND2P61296 217 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 ICA1Q05084 483 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 MTMR2Q13614 643 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 MOGSQ13724 837 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 PPP4R3BQ5MIZ7 849 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 AKNAD1Q5T1N1 836 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 MFSD6Q6ZSS7 791 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 FAM43AQ8N2R8 423 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 NEDD1Q8NHV4 660 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 STAG1Q8WVM7 1258 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 KIAA1683Q9H0B3 1180 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 PNMA3Q9UL41 463 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 AGTPBP1Q9UPW5 1226 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 SLC45A1Q9Y2W3 748 aa9.79□□□□□ -0.84
PLD3-208ENST00000464586 COL11A1P12107 1806 aaPredicted RBP9.78□□□□□ -0.84
PLD3-208ENST00000464586 TSPY2A6NKD2 308 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 RANBP6O60518 1105 aaKnown RBP9.78□□□□□ -0.84
PLD3-208ENST00000464586 OSBPP22059 807 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 LBX1P52954 281 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 TFAP4Q01664 338 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 PTH1RQ03431 593 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 NOM1Q5C9Z4 860 aaKnown RBP9.78□□□□□ -0.84
PLD3-208ENST00000464586 RRP12Q5JTH9 1297 aaKnown RBP9.78□□□□□ -0.84
PLD3-208ENST00000464586 GPAT2Q6NUI2 795 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 MAP4K1Q92918 833 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 C12orf42Q96LP6 360 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 PARK7Q99497 189 aaKnown RBP9.78□□□□□ -0.84
PLD3-208ENST00000464586 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 NYAP2Q9P242 653 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 TSKSQ9UJT2 592 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 TMX2Q9Y320 296 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 DOCK3Q8IZD9 2030 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 RLFQ13129 1914 aa9.78□□□□□ -0.84
PLD3-208ENST00000464586 PLIN4Q96Q06 1357 aa9.77□□□□□ -0.84
PLD3-208ENST00000464586 IGKV6D-41A0A0C4DH26 115 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 EEF2P13639 858 aaKnown RBP9.77□□□□□ -0.85
PLD3-208ENST00000464586 ATP2B2Q01814 1243 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 CRHR2Q13324 411 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 ZYXQ15942 572 aaKnown RBP9.77□□□□□ -0.85
PLD3-208ENST00000464586 FAM47AQ5JRC9 791 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 ACER1Q8TDN7 264 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 ESR2Q92731 530 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.77□□□□□ -0.85
PLD3-208ENST00000464586 CNNM2Q9H8M5 875 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 ANO2Q9NQ90 1003 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 INCENPQ9NQS7 918 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 EMILIN3Q9NT22 766 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 MYH6P13533 1939 aa9.77□□□□□ -0.85
PLD3-208ENST00000464586 ZNFX1Q9P2E3 1918 aaKnown RBP9.76□□□□□ -0.85
PLD3-208ENST00000464586 A0A1W2PRG0 241 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 GPR25O00155 361 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 TLR2O60603 784 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 TTLL1O95922 423 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 HOXA7P31268 230 aaPredicted RBP9.76□□□□□ -0.85
PLD3-208ENST00000464586 IRX3P78415 501 aaPredicted RBP9.76□□□□□ -0.85
PLD3-208ENST00000464586 TRDNQ13061 729 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 CCDC178Q5BJE1 867 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 TREML2Q5T2D2 321 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 CLEC10AQ8IUN9 316 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 TBC1D10CQ8IV04 446 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 LPAR1Q92633 364 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 MKL1Q969V6 931 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 CEP95Q96GE4 821 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 KRT23Q9C075 422 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 LSG1Q9H089 658 aaKnown RBP9.76□□□□□ -0.85
PLD3-208ENST00000464586 VCPKMTQ9H867 229 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 GOPCQ9HD26 462 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 MTMR4Q9NYA4 1195 aa9.76□□□□□ -0.85
PLD3-208ENST00000464586 CLIP2Q9UDT6 1046 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms