RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 SPRED2Q7Z698 418 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 KIAA0825Q8IV33 1275 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 MCATQ8IVS2 390 aaKnown RBP7.41□□□□□ -1.22
USP25-207ENST00000464435 SPACA3Q8IXA5 215 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 JARID2Q92833 1246 aaPredicted RBP7.41□□□□□ -1.22
USP25-207ENST00000464435 DRC1Q96MC2 740 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 MIPEPQ99797 713 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 SPON2Q9BUD6 331 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 PPP1R1BQ9UD71 204 aaPredicted RBP7.41□□□□□ -1.22
USP25-207ENST00000464435 TPX2Q9ULW0 747 aaKnown RBP7.41□□□□□ -1.22
USP25-207ENST00000464435 U3KQE9 123 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 ROBO2Q9HCK4 1378 aa7.41□□□□□ -1.22
USP25-207ENST00000464435 CD8BP10966 210 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 KIR3DL1P43629 444 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 BNIP3Q12983 259 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 PLCL1Q15111 1095 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 SF3A1Q15459 793 aaKnown RBP7.4□□□□□ -1.22
USP25-207ENST00000464435 NKPD1Q17RQ9 610 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 TMEM201Q5SNT2 666 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 PRAMEF13Q5VWM6 474 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 FBXL19Q6PCT2 694 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 GPRASP2Q96D09 838 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 TMEM87BQ96K49 555 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 TANGO6Q9C0B7 1094 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 TJP2Q9UDY2 1190 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 PRR36Q9H6K5 1346 aa7.4□□□□□ -1.22
USP25-207ENST00000464435 BIN1O00499 593 aa7.39□□□□□ -1.23
USP25-207ENST00000464435 ITIH2P19823 946 aa7.39□□□□□ -1.23
USP25-207ENST00000464435 JAG1P78504 1218 aa7.39□□□□□ -1.23
USP25-207ENST00000464435 GNL2Q13823 731 aaKnown RBP7.39□□□□□ -1.23
USP25-207ENST00000464435 ZNF296Q8WUU4 475 aaPredicted RBP7.39□□□□□ -1.23
USP25-207ENST00000464435 EAF1Q96JC9 268 aaPredicted RBP7.39□□□□□ -1.23
USP25-207ENST00000464435 KCNQ5Q9NR82 932 aa7.39□□□□□ -1.23
USP25-207ENST00000464435 LMCD1Q9NZU5 365 aa7.39□□□□□ -1.23
USP25-207ENST00000464435 ITGB5P18084 799 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 ETV3P41162 512 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 MPP2Q14168 576 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 SNAP47Q5SQN1 464 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 BNC2Q6ZN30 1099 aaPredicted RBP7.38□□□□□ -1.23
USP25-207ENST00000464435 ZNF574Q6ZN55 896 aaPredicted RBP7.38□□□□□ -1.23
USP25-207ENST00000464435 MFSD4AQ8N468 514 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 GOLM1Q8NBJ4 401 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 ASIC4Q96FT7 647 aa7.38□□□□□ -1.23
USP25-207ENST00000464435 LOC105371045A0A1W2PR82 267 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 FAM155AB1AL88 458 aaPredicted RBP7.37□□□□□ -1.23
USP25-207ENST00000464435 F13A1P00488 732 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 FGRP09769 529 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 CRKP46108 304 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 YARSP54577 528 aaKnown RBP7.37□□□□□ -1.23
USP25-207ENST00000464435 ARID5AQ03989 594 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 ZNF792Q3KQV3 632 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 THAP5Q7Z6K1 395 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 MCF2L2Q86YR7 1114 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 PIWIL2Q8TC59 973 aaKnown RBP7.37□□□□□ -1.23
USP25-207ENST00000464435 PI4K2BQ8TCG2 481 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 RASGRP4Q8TDF6 673 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 ACSF2Q96CM8 615 aaPredicted RBP7.37□□□□□ -1.23
USP25-207ENST00000464435 GMLQ99445 158 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 UBP1Q9NZI7 540 aa7.37□□□□□ -1.23
USP25-207ENST00000464435 PITPNM2Q9BZ72 1349 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 GREM1O60565 184 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 PLCG1P19174 1290 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 OGFOD2Q6N063 350 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 FAM196AQ6ZSG2 479 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 ATG4DQ86TL0 474 aaPredicted RBP7.36□□□□□ -1.23
USP25-207ENST00000464435 FBXO27Q8NI29 283 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 DHX38Q92620 1227 aaKnown RBP7.36□□□□□ -1.23
USP25-207ENST00000464435 LRRC3Q9BY71 257 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 KRTAP4-2Q9BYR5 136 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 CEP131Q9UPN4 1083 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 SUPT16HQ9Y5B9 1047 aaKnown RBP7.36□□□□□ -1.23
USP25-207ENST00000464435 CAPN6Q9Y6Q1 641 aa7.36□□□□□ -1.23
USP25-207ENST00000464435 ATF4P18848 351 aaPredicted RBP7.35□□□□□ -1.23
USP25-207ENST00000464435 MLECQ14165 292 aa7.35□□□□□ -1.23
USP25-207ENST00000464435 SLFN12Q8IYM2 578 aa7.35□□□□□ -1.23
USP25-207ENST00000464435 RIN3Q8TB24 985 aa7.35□□□□□ -1.23
USP25-207ENST00000464435 CYB5D2Q8WUJ1 264 aa7.35□□□□□ -1.23
USP25-207ENST00000464435 UBXN4Q92575 508 aa7.35□□□□□ -1.23
USP25-207ENST00000464435 TLR3O15455 904 aaKnown RBP7.34□□□□□ -1.23
USP25-207ENST00000464435 REC114Q7Z4M0 266 aa7.34□□□□□ -1.23
USP25-207ENST00000464435 DNAJC2Q99543 621 aaKnown RBP7.34□□□□□ -1.23
USP25-207ENST00000464435 NT5C1AQ9BXI3 368 aa7.34□□□□□ -1.23
USP25-207ENST00000464435 SEMA3GQ9NS98 782 aa7.34□□□□□ -1.23
USP25-207ENST00000464435 GINM1Q9NU53 330 aa7.34□□□□□ -1.23
USP25-207ENST00000464435 MBNL3Q9NUK0 354 aaKnown RBP7.34□□□□□ -1.23
USP25-207ENST00000464435 EFR3BQ9Y2G0 817 aa7.34□□□□□ -1.23
USP25-207ENST00000464435 ST14Q9Y5Y6 855 aa7.34□□□□□ -1.23
USP25-207ENST00000464435 RNASE1P07998 156 aaKnown RBP7.33□□□□□ -1.24
USP25-207ENST00000464435 ATP2B1P20020 1258 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 GTF2F1P35269 517 aaKnown RBP eCLIP7.33□□□□□ -1.24
USP25-207ENST00000464435 NASPP49321 788 aaPredicted RBP7.33□□□□□ -1.24
USP25-207ENST00000464435 APOBRQ0VD83 1088 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 IKZF1Q13422 519 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 CWF19L2Q2TBE0 894 aaKnown RBP7.33□□□□□ -1.24
USP25-207ENST00000464435 CDH24Q86UP0 819 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 FAM13CQ8NE31 585 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 DNAJB8Q8NHS0 232 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 XAGE3Q8WTP9 111 aa7.33□□□□□ -1.24
USP25-207ENST00000464435 CCDC120Q96HB5 630 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms