RNA–Protein interactions for RNA: ENST00000464274.5

HCLS1-203, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 4

Gene HCLS1, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-203ENST00000464274 USP17L11C9JVI0 530 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 USP17L18D6R9N7 530 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 USP17L22D6RA61 530 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 USP17L17D6RBQ6 530 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 USP17L19D6RCP7 530 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 USP17L20D6RJB6 530 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 GLRX3O76003 335 aaKnown RBP18.39■□□□□ 0.53
HCLS1-203ENST00000464274 GH2P01242 217 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 HOXC6P09630 235 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 USP17L24Q0WX57 530 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 BADQ92934 168 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 TRIM34Q9BYJ4 488 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 DNAH12Q6ZR08 3092 aa18.39■□□□□ 0.53
HCLS1-203ENST00000464274 FRMPD3Q5JV73 1810 aa18.38■□□□□ 0.53
HCLS1-203ENST00000464274 MSCO60682 206 aa18.38■□□□□ 0.53
HCLS1-203ENST00000464274 CCNA1P78396 465 aa18.38■□□□□ 0.53
HCLS1-203ENST00000464274 MTX1Q13505 466 aa18.38■□□□□ 0.53
HCLS1-203ENST00000464274 ANO1Q5XXA6 986 aa18.38■□□□□ 0.53
HCLS1-203ENST00000464274 C12orf42Q96LP6 360 aa18.38■□□□□ 0.53
HCLS1-203ENST00000464274 MAST2Q6P0Q8 1798 aa18.37■□□□□ 0.53
HCLS1-203ENST00000464274 UQCRFS1P1P0C7P4 283 aa18.37■□□□□ 0.53
HCLS1-203ENST00000464274 CYBAP13498 195 aa18.37■□□□□ 0.53
HCLS1-203ENST00000464274 PLCG2P16885 1265 aa18.37■□□□□ 0.53
HCLS1-203ENST00000464274 DYNLL1P63167 89 aaKnown RBP18.37■□□□□ 0.53
HCLS1-203ENST00000464274 GRB14Q14449 540 aa18.37■□□□□ 0.53
HCLS1-203ENST00000464274 SH3RF1Q7Z6J0 888 aa18.37■□□□□ 0.53
HCLS1-203ENST00000464274 API5Q9BZZ5 524 aaKnown RBP18.37■□□□□ 0.53
HCLS1-203ENST00000464274 PRDM5Q9NQX1 630 aaPredicted RBP18.37■□□□□ 0.53
HCLS1-203ENST00000464274 EYSQ5T1H1 3165 aa18.36■□□□□ 0.53
HCLS1-203ENST00000464274 TRIM43BA6NCK2 446 aa18.36■□□□□ 0.53
HCLS1-203ENST00000464274 SMAD3P84022 425 aaKnown RBP18.36■□□□□ 0.53
HCLS1-203ENST00000464274 TRIM60Q495X7 471 aa18.36■□□□□ 0.53
HCLS1-203ENST00000464274 ARRDC4Q8NCT1 418 aa18.36■□□□□ 0.53
HCLS1-203ENST00000464274 ACER1Q8TDN7 264 aa18.36■□□□□ 0.53
HCLS1-203ENST00000464274 TRIM43Q96BQ3 446 aaPredicted RBP18.36■□□□□ 0.53
HCLS1-203ENST00000464274 LTBP2Q14767 1821 aa18.35■□□□□ 0.53
HCLS1-203ENST00000464274 PRUNE2Q8WUY3 3088 aa18.35■□□□□ 0.53
HCLS1-203ENST00000464274 CYP2E1P05181 493 aaPredicted RBP18.35■□□□□ 0.53
HCLS1-203ENST00000464274 TATDN1Q6P1N9 297 aa18.35■□□□□ 0.53
HCLS1-203ENST00000464274 LBX2Q6XYB7 198 aa18.35■□□□□ 0.53
HCLS1-203ENST00000464274 IVNS1ABPQ9Y6Y0 642 aa18.35■□□□□ 0.53
HCLS1-203ENST00000464274 RLFQ13129 1914 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 HLA-DOAP06340 250 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 VCAM1P19320 739 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 ITGB8P26012 769 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 G3BP1Q13283 466 aaKnown RBP eCLIP18.34■□□□□ 0.53
HCLS1-203ENST00000464274 PRAMEF19Q5SWL8 479 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 FERMT2Q96AC1 680 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 FEZ1Q99689 392 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 PDLIM7Q9NR12 457 aa18.34■□□□□ 0.53
HCLS1-203ENST00000464274 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 SPDYE16A6NNV3 312 aaPredicted RBP18.33■□□□□ 0.52
HCLS1-203ENST00000464274 MYCNP04198 464 aaPredicted RBP18.33■□□□□ 0.52
HCLS1-203ENST00000464274 GNAI3P08754 354 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 FOSL2P15408 326 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 ADCYAP1R1P41586 468 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 SNX17Q15036 470 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 RAB3GAP1Q15042 981 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 DPP9Q86TI2 863 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 TRMT2AQ8IZ69 625 aaKnown RBP18.33■□□□□ 0.52
HCLS1-203ENST00000464274 KIAA1683Q9H0B3 1180 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 PIH1D3Q9NQM4 214 aaKnown RBP18.33■□□□□ 0.52
HCLS1-203ENST00000464274 CDK5RAP2Q96SN8 1893 aa18.33■□□□□ 0.52
HCLS1-203ENST00000464274 KBTBD13C9JR72 458 aa18.32■□□□□ 0.52
HCLS1-203ENST00000464274 COBLO75128 1261 aa18.32■□□□□ 0.52
HCLS1-203ENST00000464274 USP14P54578 494 aa18.32■□□□□ 0.52
HCLS1-203ENST00000464274 EPHB4P54760 987 aa18.32■□□□□ 0.52
HCLS1-203ENST00000464274 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
HCLS1-203ENST00000464274 SYMPKQ92797 1274 aaKnown RBP18.32■□□□□ 0.52
HCLS1-203ENST00000464274 DBNDD2Q9BQY9 259 aa18.32■□□□□ 0.52
HCLS1-203ENST00000464274 MOV10L1Q9BXT6 1211 aaKnown RBP18.32■□□□□ 0.52
HCLS1-203ENST00000464274 RPAP3Q9H6T3 665 aaPredicted RBP18.32■□□□□ 0.52
HCLS1-203ENST00000464274 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 SEPT4O43236 478 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 ADORA2AP29274 412 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 ZAP70P43403 619 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 TLE2Q04725 743 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 LRRC41Q15345 812 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 OLFML2BQ68BL8 750 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 ATF7IPQ6VMQ6 1270 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 USP38Q8NB14 1042 aa18.31■□□□□ 0.52
HCLS1-203ENST00000464274 CYP7A1P22680 504 aa18.3■□□□□ 0.52
HCLS1-203ENST00000464274 GUCY1A2P33402 732 aa18.3■□□□□ 0.52
HCLS1-203ENST00000464274 GRIN2CQ14957 1233 aa18.3■□□□□ 0.52
HCLS1-203ENST00000464274 ABCB5Q2M3G0 1257 aa18.3■□□□□ 0.52
HCLS1-203ENST00000464274 CERKLQ49MI3 558 aaPredicted RBP18.3■□□□□ 0.52
HCLS1-203ENST00000464274 CCDC158Q5M9N0 1113 aa18.3■□□□□ 0.52
HCLS1-203ENST00000464274 MYO5AQ9Y4I1 1855 aaKnown RBP18.3■□□□□ 0.52
HCLS1-203ENST00000464274 STRNO43815 780 aa18.29■□□□□ 0.52
HCLS1-203ENST00000464274 COL9A1P20849 921 aa18.29■□□□□ 0.52
HCLS1-203ENST00000464274 TNNI3KQ59H18 835 aa18.29■□□□□ 0.52
HCLS1-203ENST00000464274 C1orf53Q5VUE5 145 aa18.29■□□□□ 0.52
HCLS1-203ENST00000464274 MIGA1Q8NAN2 632 aa18.29■□□□□ 0.52
HCLS1-203ENST00000464274 SERPINB13Q9UIV8 391 aa18.29■□□□□ 0.52
HCLS1-203ENST00000464274 FPGT-TNNI3KV9GXZ4 949 aa18.29■□□□□ 0.52
HCLS1-203ENST00000464274 SMCHD1A6NHR9 2005 aa18.28■□□□□ 0.52
HCLS1-203ENST00000464274 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
HCLS1-203ENST00000464274 ERCC3P19447 782 aa18.28■□□□□ 0.52
HCLS1-203ENST00000464274 COG2Q14746 738 aa18.28■□□□□ 0.52
HCLS1-203ENST00000464274 RNPC3Q96LT9 517 aaKnown RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms