RNA–Protein interactions for RNA: ENST00000464225.5

CHKB-203, Transcript of choline kinase beta, humanhuman

TSL 2

Gene CHKB, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-203ENST00000464225 SMIM22K7EJ46 135 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 SLC34A2O95436 690 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 VCAM1P19320 739 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 USP14P54578 494 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 RRP1P56182 461 aaKnown RBP12.13□□□□□ -0.47
CHKB-203ENST00000464225 SEPT2Q15019 361 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 NKX2-3Q8TAU0 364 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 DYNLL2Q96FJ2 89 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 PUS7LQ9H0K6 701 aaKnown RBP12.13□□□□□ -0.47
CHKB-203ENST00000464225 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 RBPJLQ9UBG7 517 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 GJD2Q9UKL4 321 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 PLXNB2O15031 1838 aa12.13□□□□□ -0.47
CHKB-203ENST00000464225 CYP2D7A0A087X1C5 515 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 A0A1W2PRG0 241 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 MPHOSPH10O00566 681 aaKnown RBP12.12□□□□□ -0.47
CHKB-203ENST00000464225 ERVK-9P63128 1117 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 ERVK-24P63145 666 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 Q3C1V9 767 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 ZSCAN25Q6NSZ9 544 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 UBE2Q1Q7Z7E8 422 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 U2AF1L4Q8WU68 220 aaKnown RBP12.12□□□□□ -0.47
CHKB-203ENST00000464225 GTF3C2Q8WUA4 911 aaPredicted RBP12.12□□□□□ -0.47
CHKB-203ENST00000464225 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 PAGR1Q9BTK6 254 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 PORCNQ9H237 461 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 SWAP70Q9UH65 585 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
CHKB-203ENST00000464225 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L21D6R901 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 CNMDO75829 334 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 HMGCRP04035 888 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 AKR1B1P15121 316 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 C12orf60Q5U649 245 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 CATSPERGQ6ZRH7 1159 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 TMEM179Q6ZVK1 233 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 CLEC10AQ8IUN9 316 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 KBTBD3Q8NAB2 608 aa12.11□□□□□ -0.47
CHKB-203ENST00000464225 RPAP3Q9H6T3 665 aaPredicted RBP12.11□□□□□ -0.47
CHKB-203ENST00000464225 PAK6Q9NQU5 681 aaPredicted RBP12.11□□□□□ -0.47
CHKB-203ENST00000464225 MYH8P13535 1937 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 SGPL1O95470 568 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 CYP2B6P20813 491 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 MAPK4P31152 587 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 TRIM32Q13049 653 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 GPR142Q7Z601 462 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 OTUD7AQ8TE49 926 aaPredicted RBP12.1□□□□□ -0.47
CHKB-203ENST00000464225 SOCS4Q8WXH5 440 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 TRIB2Q92519 343 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 DEFB118Q96PH6 123 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 STRBPQ96SI9 672 aaKnown RBP12.1□□□□□ -0.47
CHKB-203ENST00000464225 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 RABGAP1Q9Y3P9 1069 aa12.1□□□□□ -0.47
CHKB-203ENST00000464225 SPDYE16A6NNV3 312 aaPredicted RBP12.09□□□□□ -0.47
CHKB-203ENST00000464225 FARP2O94887 1054 aaPredicted RBP12.09□□□□□ -0.47
CHKB-203ENST00000464225 CDK8P49336 464 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 ICA1Q05084 483 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 KIAA1755Q5JYT7 1200 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 CTR9Q6PD62 1173 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 LBX2Q6XYB7 198 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 C16orf86Q6ZW13 317 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 PLEKHH3Q7Z736 793 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 SIAH1Q8IUQ4 282 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 CCAR1Q8IX12 1150 aaKnown RBP12.09□□□□□ -0.47
CHKB-203ENST00000464225 AMOTL1Q8IY63 956 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 APPBP2Q92624 585 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 OSBP2Q969R2 916 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 CRBNQ96SW2 442 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 CRISPLD2Q9H0B8 497 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
CHKB-203ENST00000464225 TTC41PQ6P2S7 1318 aa12.09□□□□□ -0.47
CHKB-203ENST00000464225 RNF113AO15541 343 aaKnown RBP12.08□□□□□ -0.48
CHKB-203ENST00000464225 XRCC5P13010 732 aaKnown RBP12.08□□□□□ -0.48
CHKB-203ENST00000464225 CCNA1P78396 465 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 MORN1Q5T089 497 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 PI4K2BQ8TCG2 481 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 USP6NLQ92738 828 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 GCC1Q96CN9 775 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 CCDC17Q96LX7 622 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
CHKB-203ENST00000464225 BTBD7Q9P203 1132 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 ARPP21Q9UBL0 812 aaPredicted RBP12.08□□□□□ -0.48
CHKB-203ENST00000464225 CEP290O15078 2479 aa12.08□□□□□ -0.48
CHKB-203ENST00000464225 A0A0G2JMZ2 1700 aa12.07□□□□□ -0.48
CHKB-203ENST00000464225 GSG1L2A8MUP6 293 aa12.07□□□□□ -0.48
CHKB-203ENST00000464225 H0YGN5 161 aa12.07□□□□□ -0.48
CHKB-203ENST00000464225 M0R2C6 588 aa12.07□□□□□ -0.48
CHKB-203ENST00000464225 GPAA1O43292 621 aa12.07□□□□□ -0.48
CHKB-203ENST00000464225 TFRCP02786 760 aaKnown RBP12.07□□□□□ -0.48
CHKB-203ENST00000464225 ZFYP08048 801 aaPredicted RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms