RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 ZNF862O60290 1169 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 ENOX2Q16206 610 aaKnown RBP5.36□□□□□ -1.55
SCFD1-204ENST00000463622 UNC5CLQ8IV45 518 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 EZH1Q92800 747 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-204ENST00000463622 PIM2Q9P1W9 311 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 LEMD3Q9Y2U8 911 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 ADGRL3Q9HAR2 1447 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 ANKRD50Q9ULJ7 1429 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 EIF4EBP3O60516 100 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-204ENST00000463622 SPINK2P20155 84 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 AP3B2Q13367 1082 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 RPS26P11Q5JNZ5 115 aaPredicted RBP5.36□□□□□ -1.55
SCFD1-204ENST00000463622 INTS5Q6P9B9 1019 aaKnown RBP5.36□□□□□ -1.55
SCFD1-204ENST00000463622 GATA6Q92908 595 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 KCNB2Q92953 911 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 PPP4R2Q9NY27 417 aa5.36□□□□□ -1.55
SCFD1-204ENST00000463622 OAS3Q9Y6K5 1087 aaKnown RBP5.36□□□□□ -1.55
SCFD1-204ENST00000463622 TRPM2O94759 1503 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 ADGRL2O95490 1459 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 MYOM2P54296 1465 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 MPRIPQ6WCQ1 1025 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 ZAR1Q86SH2 424 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 YIPF2Q9BWQ6 316 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 ACSS3Q9H6R3 686 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 TMEM39AQ9NV64 488 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 TMPRSS2O15393 492 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 FBXO24O75426 580 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 GSTP1P09211 210 aaKnown RBP5.35□□□□□ -1.55
SCFD1-204ENST00000463622 GP2P55259 537 aaKnown RBP5.35□□□□□ -1.55
SCFD1-204ENST00000463622 HP1BP3Q5SSJ5 553 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-204ENST00000463622 DTX1Q86Y01 620 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 OSBPL7Q9BZF2 842 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 ZFYVE1Q9HBF4 777 aa5.35□□□□□ -1.55
SCFD1-204ENST00000463622 NHSL1Q5SYE7 1610 aa5.34□□□□□ -1.55
SCFD1-204ENST00000463622 NAIPQ13075 1403 aa5.34□□□□□ -1.55
SCFD1-204ENST00000463622 TPTE2Q6XPS3 522 aa5.34□□□□□ -1.55
SCFD1-204ENST00000463622 ZNF765Q7L2R6 523 aa5.34□□□□□ -1.55
SCFD1-204ENST00000463622 GIMAP7Q8NHV1 300 aa5.34□□□□□ -1.55
SCFD1-204ENST00000463622 LRRC4CQ9HCJ2 640 aa5.34□□□□□ -1.55
SCFD1-204ENST00000463622 C1GALT1Q9NS00 363 aa5.34□□□□□ -1.55
SCFD1-204ENST00000463622 NPHP3Q7Z494 1330 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-204ENST00000463622 CYP26A1O43174 497 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 FOSL1P15407 271 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 PPP2R3AQ06190 1150 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 MAP7Q14244 749 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 VPS72Q15906 364 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 MAP1SQ66K74 1059 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-204ENST00000463622 PDZD3Q86UT5 571 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 SULF2Q8IWU5 870 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 ZSCAN29Q8IWY8 852 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-204ENST00000463622 C3orf58Q8NDZ4 430 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 FANCD2OSQ96PS1 177 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 GSX1Q9H4S2 264 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-204ENST00000463622 CRIM1Q9NZV1 1036 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 ROBO2Q9HCK4 1378 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 RALGAPBQ86X10 1494 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 SLIT2O94813 1529 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 LAMC1P11047 1609 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 WNT11O96014 354 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 SLFN14P0C7P3 912 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 HCLS1P14317 486 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-204ENST00000463622 FMR1Q06787 632 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCFD1-204ENST00000463622 KCNA1Q09470 495 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 CDK5R2Q13319 367 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 SEZ6L2Q6UXD5 910 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 KRT27Q7Z3Y8 459 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 GRIN3AQ8TCU5 1115 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 ASB16Q96NS5 453 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 CBX8Q9HC52 389 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 DISC1Q9NRI5 854 aa5.33□□□□□ -1.56
SCFD1-204ENST00000463622 HFM1A2PYH4 1435 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 PRAG1Q86YV5 1406 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 GCC2Q8IWJ2 1684 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 UNC13BO14795 1591 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 RAB3GAP2Q9H2M9 1393 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 RNGTTO60942 597 aaKnown RBP5.32□□□□□ -1.56
SCFD1-204ENST00000463622 PAGE1O75459 146 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 ID3Q02535 119 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 TTLL4Q14679 1199 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 MSMPQ1L6U9 139 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 PCDHGC5Q9Y5F6 944 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 CSADQ9Y600 493 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 XRN1Q8IZH2 1706 aaKnown RBP5.32□□□□□ -1.56
SCFD1-204ENST00000463622 SPATA31A3Q5VYP0 1347 aa5.32□□□□□ -1.56
SCFD1-204ENST00000463622 NUP155O75694 1391 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 P4HBP07237 508 aaKnown RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 XRCC5P13010 732 aaKnown RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 ARNTP27540 789 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 KIF4BQ2VIQ3 1234 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 ZNF326Q5BKZ1 582 aaKnown RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 NECAB3Q96P71 396 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 PIDD1Q9HB75 910 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 LRP5O75197 1615 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 LRPPRCP42704 1394 aaKnown RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 ROCK1Q13464 1354 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 YY1P25490 414 aa5.31□□□□□ -1.56
SCFD1-204ENST00000463622 XPCQ01831 940 aaPredicted RBP5.31□□□□□ -1.56
SCFD1-204ENST00000463622 DUSP27Q5VZP5 1158 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms