RNA–Protein interactions for RNA: ENST00000463411.1

PDLIM7-206, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 1,015 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-206ENST00000463411 CCAR1Q8IX12 1150 aaKnown RBP26.72■■□□□ 1.87
PDLIM7-206ENST00000463411 UNC93B1Q9H1C4 597 aa26.72■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L15C9J2P7 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L13C9JLJ4 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L11C9JVI0 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L18D6R9N7 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L22D6RA61 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L17D6RBQ6 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L19D6RCP7 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L20D6RJB6 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 USP17L24Q0WX57 530 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 U2AF1L4Q8WU68 220 aaKnown RBP26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 PAGR1Q9BTK6 254 aa26.71■■□□□ 1.87
PDLIM7-206ENST00000463411 MKI67P46013 3256 aaKnown RBP26.7■■□□□ 1.87
PDLIM7-206ENST00000463411 SLC34A2O95436 690 aa26.7■■□□□ 1.86
PDLIM7-206ENST00000463411 TXNRD2Q9NNW7 524 aa26.7■■□□□ 1.86
PDLIM7-206ENST00000463411 PLXNB2O15031 1838 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 PRKAB2O43741 272 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 HMGCRP04035 888 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 CYP2D6P10635 497 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 VCAM1P19320 739 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 MAPK4P31152 587 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 ERVK-9P63128 1117 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 ERVK-24P63145 666 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 SEPT2Q15019 361 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 SLFNL1Q499Z3 407 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 ACER1Q8TDN7 264 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 SOCS4Q8WXH5 440 aa26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 CWC22Q9HCG8 908 aaKnown RBP26.69■■□□□ 1.86
PDLIM7-206ENST00000463411 CAPN2P17655 700 aa26.68■■□□□ 1.86
PDLIM7-206ENST00000463411 EVX2Q03828 476 aa26.68■■□□□ 1.86
PDLIM7-206ENST00000463411 TMEM179Q6ZVK1 233 aa26.68■■□□□ 1.86
PDLIM7-206ENST00000463411 RBPJLQ9UBG7 517 aa26.68■■□□□ 1.86
PDLIM7-206ENST00000463411 SUPT16HQ9Y5B9 1047 aaKnown RBP26.68■■□□□ 1.86
PDLIM7-206ENST00000463411 SLC4A4Q9Y6R1 1079 aa26.68■■□□□ 1.86
PDLIM7-206ENST00000463411 SGPL1O95470 568 aa26.67■■□□□ 1.86
PDLIM7-206ENST00000463411 GUCY1A2P33402 732 aa26.67■■□□□ 1.86
PDLIM7-206ENST00000463411 NUDT12Q9BQG2 462 aa26.67■■□□□ 1.86
PDLIM7-206ENST00000463411 GJD2Q9UKL4 321 aa26.67■■□□□ 1.86
PDLIM7-206ENST00000463411 CCNA1P78396 465 aa26.66■■□□□ 1.86
PDLIM7-206ENST00000463411 CATSPERGQ6ZRH7 1159 aa26.66■■□□□ 1.86
PDLIM7-206ENST00000463411 SLC44A5Q8NCS7 719 aa26.66■■□□□ 1.86
PDLIM7-206ENST00000463411 RABGAP1Q9Y3P9 1069 aa26.66■■□□□ 1.86
PDLIM7-206ENST00000463411 PEX10O60683 326 aa26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 CHGBP05060 677 aa26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 KBTBD3Q8NAB2 608 aa26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 DYNLL2Q96FJ2 89 aa26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 DEFB118Q96PH6 123 aa26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 HTATIP2Q9BUP3 242 aa26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 RPAP3Q9H6T3 665 aaPredicted RBP26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 PAK6Q9NQU5 681 aaPredicted RBP26.65■■□□□ 1.86
PDLIM7-206ENST00000463411 FARP2O94887 1054 aaPredicted RBP26.64■■□□□ 1.86
PDLIM7-206ENST00000463411 C12orf60Q5U649 245 aa26.64■■□□□ 1.86
PDLIM7-206ENST00000463411 CCDC17Q96LX7 622 aa26.64■■□□□ 1.86
PDLIM7-206ENST00000463411 XRN2Q9H0D6 950 aaKnown RBP eCLIP26.64■■□□□ 1.865e-6■□□□□ 8.4
PDLIM7-206ENST00000463411 PUS7LQ9H0K6 701 aaKnown RBP26.64■■□□□ 1.86
PDLIM7-206ENST00000463411 SH2D4AQ9H788 454 aa26.64■■□□□ 1.86
PDLIM7-206ENST00000463411 ARHGEF10LQ9HCE6 1279 aa26.64■■□□□ 1.86
PDLIM7-206ENST00000463411 ARPP21Q9UBL0 812 aaPredicted RBP26.64■■□□□ 1.86
PDLIM7-206ENST00000463411 USP17L12C9JPN9 530 aa26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 USP17L21D6R901 530 aa26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 TFRCP02786 760 aaKnown RBP26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 CYP2B6P20813 491 aa26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 LRRFIP1Q32MZ4 808 aaKnown RBP26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 GPR142Q7Z601 462 aa26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 PLEKHH3Q7Z736 793 aa26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 TRMT44Q8IYL2 757 aaKnown RBP26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 PORCNQ9H237 461 aa26.63■■□□□ 1.85
PDLIM7-206ENST00000463411 GLRX3O76003 335 aaKnown RBP26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 ZFYP08048 801 aaPredicted RBP26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 ICA1Q05084 483 aa26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 Q3C1V9 767 aa26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 TSHZ3Q63HK5 1081 aa26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 LBX2Q6XYB7 198 aa26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 DPF3Q92784 378 aa26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 HMX1Q9NP08 348 aaPredicted RBP26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 PCDHB15Q9Y5E8 787 aa26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 TTC41PQ6P2S7 1318 aa26.62■■□□□ 1.85
PDLIM7-206ENST00000463411 CYP2D7A0A087X1C5 515 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 ERC2O15083 957 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 XRCC5P13010 732 aaKnown RBP26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 RGS2P41220 211 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 CDK8P49336 464 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 C16orf86Q6ZW13 317 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 UBE2Q1Q7Z7E8 422 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 TRIB2Q92519 343 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 APPBP2Q92624 585 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 TANGO6Q9C0B7 1094 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 RPTORQ8N122 1335 aa26.61■■□□□ 1.85
PDLIM7-206ENST00000463411 A0A1W2PRG0 241 aa26.6■■□□□ 1.85
PDLIM7-206ENST00000463411 AKR1B1P15121 316 aa26.6■■□□□ 1.85
PDLIM7-206ENST00000463411 ZKSCAN1P17029 563 aaPredicted RBP26.6■■□□□ 1.85
PDLIM7-206ENST00000463411 WDR78Q5VTH9 848 aa26.6■■□□□ 1.85
PDLIM7-206ENST00000463411 ZBTB47Q9UFB7 747 aaPredicted RBP26.6■■□□□ 1.85
PDLIM7-206ENST00000463411 SPDYE16A6NNV3 312 aaPredicted RBP26.59■■□□□ 1.85
PDLIM7-206ENST00000463411 RNF113AO15541 343 aaKnown RBP26.59■■□□□ 1.85
PDLIM7-206ENST00000463411 CNMDO75829 334 aa26.59■■□□□ 1.85
PDLIM7-206ENST00000463411 CTR9Q6PD62 1173 aa26.59■■□□□ 1.85
PDLIM7-206ENST00000463411 POTEEQ6S8J3 1075 aa26.59■■□□□ 1.85
PDLIM7-206ENST00000463411 LPAR1Q92633 364 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms