RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 ANO6Q4KMQ2 910 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 EARS2Q5JPH6 523 aaKnown RBP14.81□□□□□ -0.04
VAPB-203ENST00000463370 FAM43AQ8N2R8 423 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 CLIC6Q96NY7 704 aa14.81□□□□□ -0.04
VAPB-203ENST00000463370 SNED1Q8TER0 1413 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 AMOTL1Q8IY63 956 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 STAG2Q8N3U4 1231 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 CTCFLQ8NI51 663 aaPredicted RBP14.8□□□□□ -0.04
VAPB-203ENST00000463370 DDX4Q9NQI0 724 aaKnown RBP14.8□□□□□ -0.04
VAPB-203ENST00000463370 ADAMTS3O15072 1205 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 KINO60870 393 aaKnown RBP14.8□□□□□ -0.04
VAPB-203ENST00000463370 AKAP17AQ02040 695 aaKnown RBP14.8□□□□□ -0.04
VAPB-203ENST00000463370 SAFBQ15424 915 aaKnown RBP eCLIP14.8□□□□□ -0.04
VAPB-203ENST00000463370 NOM1Q5C9Z4 860 aaKnown RBP14.8□□□□□ -0.04
VAPB-203ENST00000463370 C16orf86Q6ZW13 317 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 LUZP1Q86V48 1076 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 PNMA1Q8ND90 353 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 FOXP1Q9H334 677 aaPredicted RBP14.8□□□□□ -0.04
VAPB-203ENST00000463370 KAT14Q9H8E8 782 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 MTMR7Q9Y216 660 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 PCDHAC2Q9Y5I4 1007 aa14.8□□□□□ -0.04
VAPB-203ENST00000463370 DLEC1Q9Y238 1755 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 PLCG2P16885 1265 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 NPY5RQ15761 445 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 SLC35G1Q2M3R5 365 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 UVSSAQ2YD98 709 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 SHC4Q6S5L8 630 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 DGKHQ86XP1 1220 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 SLF2Q8IX21 1173 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 ZNF444Q8N0Y2 327 aaPredicted RBP14.79□□□□□ -0.04
VAPB-203ENST00000463370 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 PHF20Q9BVI0 1012 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 DNAJC25Q9H1X3 360 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 STK32BQ9NY57 414 aa14.79□□□□□ -0.04
VAPB-203ENST00000463370 PFKFB1P16118 471 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 STYK1Q6J9G0 422 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 DEFB132Q7Z7B7 95 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 CERS3Q8IU89 383 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 NAV1Q8NEY1 1877 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 FAM200AQ8TCP9 573 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 ANKS1AQ92625 1134 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 CABP5Q9NP86 173 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 STX8Q9UNK0 236 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 PCDHB6Q9Y5E3 794 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 DDX60LQ5H9U9 1706 aaKnown RBP14.78□□□□□ -0.04
VAPB-203ENST00000463370 SLURP2P0DP57 97 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 ATP2B1P20020 1258 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 GRIN1Q05586 938 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 SASS6Q6UVJ0 657 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 EYA3Q99504 573 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 TMEM47Q9BQJ4 181 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 TMX4Q9H1E5 349 aaPredicted RBP14.78□□□□□ -0.04
VAPB-203ENST00000463370 CBX8Q9HC52 389 aa14.78□□□□□ -0.04
VAPB-203ENST00000463370 ESPNB1AK53 854 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 G3V3G9 751 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 WNT7AO00755 349 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 PPP6R2O75170 966 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 CMA1P23946 247 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 DCAF8Q5TAQ9 597 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 APOBEC3HQ6NTF7 200 aaKnown RBP14.77□□□□□ -0.04
VAPB-203ENST00000463370 C7orf43Q8WVR3 580 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 TCP11L1Q9NUJ3 509 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 MAD2L2Q9UI95 211 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 SUGT1Q9Y2Z0 365 aa14.77□□□□□ -0.04
VAPB-203ENST00000463370 ADCY5O95622 1261 aa14.77□□□□□ -0.05
VAPB-203ENST00000463370 SPECC1Q5M775 1068 aa14.77□□□□□ -0.05
VAPB-203ENST00000463370 C11orf57Q6ZUT1 292 aaPredicted RBP14.77□□□□□ -0.05
VAPB-203ENST00000463370 ZNF202O95125 648 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 PLCB2Q00722 1185 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 PPP4R3CPQ6ZMV5 832 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.76□□□□□ -0.05
VAPB-203ENST00000463370 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 RGPD3A6NKT7 1758 aaPredicted RBP14.76□□□□□ -0.05
VAPB-203ENST00000463370 RGPD4Q7Z3J3 1758 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 CDK5RAP2Q96SN8 1893 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 SLX4Q8IY92 1834 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 GOLGA8HP0CJ92 632 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 NFIAQ12857 509 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 AOC3Q16853 763 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 CDC42EP5Q6NZY7 148 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 PODNQ7Z5L7 613 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 KIAA0825Q8IV33 1275 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 CPVLQ9H3G5 476 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 ADAMTSL1Q8N6G6 1762 aa14.76□□□□□ -0.05
VAPB-203ENST00000463370 CTAGE5O15320 804 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 CYTH3O43739 400 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 ECE2O60344 883 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 SCG2P13521 617 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 KRT2P35908 639 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 GRM4Q14833 912 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 RILPL1Q5EBL4 403 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 TNFRSF25Q93038 417 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 CEP95Q96GE4 821 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 SDF4Q9BRK5 362 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 HPSEQ9Y251 543 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 XBP1P17861 261 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 KIF5BP33176 963 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 CACNB3P54284 484 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 GABPAQ06546 454 aa14.75□□□□□ -0.05
VAPB-203ENST00000463370 PFKFB3Q16875 520 aaPredicted RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms