RNA–Protein interactions for RNA: ENST00000463005.1

GARNL3-212, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 887 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-212ENST00000463005 USP40Q9NVE5 1235 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 DAGLAQ9Y4D2 1042 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 AFG3L2Q9Y4W6 797 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 DOCK2Q92608 1830 aa9.93□□□□□ -0.82
GARNL3-212ENST00000463005 PHIPQ8WWQ0 1821 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 PHF20L1A8MW92 1017 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 SOX1O00570 391 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-212ENST00000463005 LDHBP07195 334 aaKnown RBP9.92□□□□□ -0.82
GARNL3-212ENST00000463005 SLC5A1P13866 664 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 ELNP15502 786 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 PTPRAP18433 802 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 NFIAQ12857 509 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 PUS10Q3MIT2 529 aaKnown RBP9.92□□□□□ -0.82
GARNL3-212ENST00000463005 GADL1Q6ZQY3 521 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 MRPL50Q8N5N7 158 aaKnown RBP9.92□□□□□ -0.82
GARNL3-212ENST00000463005 SMCR8Q8TEV9 937 aaPredicted RBP9.92□□□□□ -0.82
GARNL3-212ENST00000463005 LRCH3Q96II8 777 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 IDI2Q9BXS1 227 aa9.92□□□□□ -0.82
GARNL3-212ENST00000463005 GNL3LQ9NVN8 582 aaKnown RBP9.92□□□□□ -0.82
GARNL3-212ENST00000463005 LRRFIP2Q9Y608 721 aaKnown RBP9.92□□□□□ -0.82
GARNL3-212ENST00000463005 SALL1Q9NSC2 1324 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 EYA2O00167 538 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 APBB1O00213 710 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 CTNND1O60716 968 aaKnown RBP9.91□□□□□ -0.82
GARNL3-212ENST00000463005 LRIT3Q3SXY7 679 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 SLF2Q8IX21 1173 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 ZGPATQ8N5A5 531 aaKnown RBP9.91□□□□□ -0.82
GARNL3-212ENST00000463005 ANKRD44Q8N8A2 993 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 STXBP5LQ9Y2K9 1186 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 DOCK1Q14185 1865 aa9.91□□□□□ -0.82
GARNL3-212ENST00000463005 ZBED9Q6R2W3 1325 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 RPTORQ8N122 1335 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 HRO43593 1189 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 GCLCP48506 637 aaPredicted RBP9.9□□□□□ -0.82
GARNL3-212ENST00000463005 FAM110CQ1W6H9 321 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 TUSC1Q2TAM9 212 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.9□□□□□ -0.82
GARNL3-212ENST00000463005 HMX1Q9NP08 348 aaPredicted RBP9.9□□□□□ -0.82
GARNL3-212ENST00000463005 DENND2AQ9ULE3 1009 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 AGTPBP1Q9UPW5 1226 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 COG6Q9Y2V7 657 aa9.9□□□□□ -0.82
GARNL3-212ENST00000463005 TK2O00142 265 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 TRAK2O60296 914 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 HMGCRP04035 888 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 CENPBP07199 599 aaPredicted RBP9.89□□□□□ -0.83
GARNL3-212ENST00000463005 PRDX5P30044 214 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 RGS3P49796 1198 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 PABPC4Q13310 644 aaKnown RBP eCLIP9.89□□□□□ -0.83
GARNL3-212ENST00000463005 ZSCAN29Q8IWY8 852 aaPredicted RBP9.89□□□□□ -0.83
GARNL3-212ENST00000463005 ZFPM1Q8IX07 1006 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 DEFB123Q8N688 67 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 ANKRD13CQ8N6S4 541 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 KLHDC4Q8TBB5 520 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 TSC1Q92574 1164 aa9.89□□□□□ -0.83
GARNL3-212ENST00000463005 ATRNL1Q5VV63 1379 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 PTPRCP08575 1304 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 RFX5P48382 616 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-212ENST00000463005 USP46P62068 366 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 C7orf61Q8IZ16 206 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 TDHQ8IZJ6 230 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 USP44Q9H0E7 712 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 OSBPL5Q9H0X9 879 aaPredicted RBP9.88□□□□□ -0.83
GARNL3-212ENST00000463005 C11orf49Q9H6J7 331 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 CEP126Q9P2H0 1117 aa9.88□□□□□ -0.83
GARNL3-212ENST00000463005 RANBP2P49792 3224 aaKnown RBP9.88□□□□□ -0.83
GARNL3-212ENST00000463005 GAKO14976 1311 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 DDTLA6NHG4 134 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-212ENST00000463005 A6NJR5 290 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 TRIM75PA6NK02 468 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 CFAP99D6REC4 459 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 CIAO1O76071 339 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 MAP4K4O95819 1239 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-212ENST00000463005 ATP2B3Q16720 1220 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 TMEM259Q4ZIN3 620 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 SPTY2D1Q68D10 685 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-212ENST00000463005 SH3BP5LQ7L8J4 393 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 ATG9AQ7Z3C6 839 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 DIS3LQ8TF46 1054 aaKnown RBP9.87□□□□□ -0.83
GARNL3-212ENST00000463005 GDPD2Q9HCC8 539 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 MTMR10Q9NXD2 777 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-212ENST00000463005 GJD2Q9UKL4 321 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 OGDHLQ9ULD0 1010 aa9.87□□□□□ -0.83
GARNL3-212ENST00000463005 ZMYND8Q9ULU4 1186 aaPredicted RBP9.87□□□□□ -0.83
GARNL3-212ENST00000463005 ATAD5Q96QE3 1844 aa9.86□□□□□ -0.83
GARNL3-212ENST00000463005 MAGEA10P43363 369 aaPredicted RBP9.86□□□□□ -0.83
GARNL3-212ENST00000463005 CTDSPL2Q05D32 466 aa9.86□□□□□ -0.83
GARNL3-212ENST00000463005 SPP2Q13103 211 aa9.86□□□□□ -0.83
GARNL3-212ENST00000463005 DDX60LQ5H9U9 1706 aaKnown RBP9.86□□□□□ -0.83
GARNL3-212ENST00000463005 TRMT44Q8IYL2 757 aaKnown RBP9.86□□□□□ -0.83
GARNL3-212ENST00000463005 ZNF280CQ8ND82 737 aa9.86□□□□□ -0.83
GARNL3-212ENST00000463005 BANK1Q8NDB2 785 aa9.86□□□□□ -0.83
GARNL3-212ENST00000463005 UBE2OQ9C0C9 1292 aaKnown RBP9.86□□□□□ -0.83
GARNL3-212ENST00000463005 HDAC5Q9UQL6 1122 aa9.86□□□□□ -0.83
GARNL3-212ENST00000463005 PLXNB2O15031 1838 aa9.86□□□□□ -0.83
GARNL3-212ENST00000463005 PDS5AQ29RF7 1337 aaKnown RBP9.85□□□□□ -0.83
GARNL3-212ENST00000463005 LDHCP07864 332 aa9.85□□□□□ -0.83
GARNL3-212ENST00000463005 XRCC5P13010 732 aaKnown RBP9.85□□□□□ -0.83
GARNL3-212ENST00000463005 IL15P40933 162 aaPredicted RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms