RNA–Protein interactions for RNA: ENST00000462743.1

HPS1-206, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 3

Gene HPS1, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-206ENST00000462743 ZNF589Q86UQ0 364 aaPredicted RBP14.41□□□□□ -0.1
HPS1-206ENST00000462743 SIAH1Q8IUQ4 282 aa14.41□□□□□ -0.1
HPS1-206ENST00000462743 DIAPH3Q9NSV4 1193 aa14.41□□□□□ -0.1
HPS1-206ENST00000462743 EMILIN3Q9NT22 766 aa14.41□□□□□ -0.1
HPS1-206ENST00000462743 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 SLC3A2P08195 630 aaKnown RBP14.4□□□□□ -0.1
HPS1-206ENST00000462743 AKR1B1P15121 316 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 RASA1P20936 1047 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 PPARAQ07869 468 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 MTMR2Q13614 643 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 RAB3GAP1Q15042 981 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 ACER1Q8TDN7 264 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 PARK7Q99497 189 aaKnown RBP14.4□□□□□ -0.1
HPS1-206ENST00000462743 KANSL2Q9H9L4 492 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 MKNK2Q9HBH9 465 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 TMOD4Q9NZQ9 345 aa14.4□□□□□ -0.1
HPS1-206ENST00000462743 BCRP11274 1271 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 CHMLP26374 656 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 PDE4BQ07343 736 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 PKN2Q16513 984 aaKnown RBP14.39□□□□□ -0.11
HPS1-206ENST00000462743 TREML2Q5T2D2 321 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 CWC27Q6UX04 472 aaKnown RBP14.39□□□□□ -0.11
HPS1-206ENST00000462743 CTU1Q7Z7A3 348 aaKnown RBP14.39□□□□□ -0.11
HPS1-206ENST00000462743 ZNF444Q8N0Y2 327 aaPredicted RBP14.39□□□□□ -0.11
HPS1-206ENST00000462743 ERO1AQ96HE7 468 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 DSCC1Q9BVC3 393 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.39□□□□□ -0.11
HPS1-206ENST00000462743 PNMA3Q9UL41 463 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.39□□□□□ -0.11
HPS1-206ENST00000462743 TMX2Q9Y320 296 aa14.39□□□□□ -0.11
HPS1-206ENST00000462743 GREB1LQ9C091 1923 aaPredicted RBP14.39□□□□□ -0.11
HPS1-206ENST00000462743 DOCK3Q8IZD9 2030 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 IGKV6D-41A0A0C4DH26 115 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 A0A1W2PRG0 241 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 MPHOSPH10O00566 681 aaKnown RBP14.38□□□□□ -0.11
HPS1-206ENST00000462743 ARHGEF6Q15052 776 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 NEDD1Q8NHV4 660 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 RUFY2Q8WXA3 655 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 PPP4R2Q9NY27 417 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 NYAP2Q9P242 653 aa14.38□□□□□ -0.11
HPS1-206ENST00000462743 ORC4O43929 436 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 CYP2C8P10632 490 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 PCP11498 1178 aaKnown RBP14.37□□□□□ -0.11
HPS1-206ENST00000462743 OSBPP22059 807 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 GCLCP48506 637 aaPredicted RBP14.37□□□□□ -0.11
HPS1-206ENST00000462743 NT5C2P49902 561 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 BMP2KLQ5H9B9 411 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 TNS4Q8IZW8 715 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 MKL1Q969V6 931 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 ASCC2Q9H1I8 757 aaPredicted RBP14.37□□□□□ -0.11
HPS1-206ENST00000462743 ARHGEF10LQ9HCE6 1279 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 RAD50Q92878 1312 aa14.37□□□□□ -0.11
HPS1-206ENST00000462743 USP17L15C9J2P7 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L13C9JLJ4 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L11C9JVI0 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L18D6R9N7 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L22D6RA61 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L17D6RBQ6 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L19D6RCP7 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L20D6RJB6 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 GNRH1P01148 92 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 ICA1Q05084 483 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 USP17L24Q0WX57 530 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 CATSPERGQ6ZRH7 1159 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 LPAR1Q92633 364 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 P2RX7Q99572 595 aaKnown RBP14.36□□□□□ -0.11
HPS1-206ENST00000462743 SH2D4AQ9H788 454 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 SYNPO2Q9UMS6 1093 aa14.36□□□□□ -0.11
HPS1-206ENST00000462743 PLIN4Q96Q06 1357 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
HPS1-206ENST00000462743 LACTBP83111 547 aaPredicted RBP14.35□□□□□ -0.11
HPS1-206ENST00000462743 CTDSPL2Q05D32 466 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 DGKZQ13574 1117 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 LBX2Q6XYB7 198 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 CD99L2Q8TCZ2 262 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 GTF3C2Q8WUA4 911 aaPredicted RBP14.35□□□□□ -0.11
HPS1-206ENST00000462743 FEZ1Q99689 392 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 MCOLN1Q9GZU1 580 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 IL25Q9H293 177 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 VCPKMTQ9H867 229 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 MORF4L1Q9UBU8 362 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 CPA4Q9UI42 421 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 CTNNA3Q9UI47 895 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 TACC3Q9Y6A5 838 aa14.35□□□□□ -0.11
HPS1-206ENST00000462743 SGSM2O43147 1006 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 PRDM1O75626 825 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 NOVP48745 357 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 CAP1Q01518 475 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 TFAP4Q01664 338 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 PPP4R3BQ5MIZ7 849 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 OTOP1Q7RTM1 612 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 STK11IPQ8N1F8 1099 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 EFCC1Q9HA90 598 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 MTMR4Q9NYA4 1195 aa14.34□□□□□ -0.11
HPS1-206ENST00000462743 VCAM1P19320 739 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 PRMT2P55345 433 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.12
HPS1-206ENST00000462743 KIF22Q14807 665 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 FAM110CQ1W6H9 321 aa14.33□□□□□ -0.12
HPS1-206ENST00000462743 KIAA1755Q5JYT7 1200 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms