RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CSRNP2Q9H175 543 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 KDM4CQ9H3R0 1056 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 MRPL44Q9H9J2 332 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 EPB41L4AQ9HCS5 686 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 LZTFL1Q9NQ48 299 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 PRDM11Q9NQV5 511 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 SAMSN1Q9NSI8 373 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 FAM217BQ9NTX9 383 aaPredicted RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 RBM28Q9NW13 759 aaKnown RBP3.99□□□□□ -1.77
COL8A1-204ENST00000462604 RMND1Q9NWS8 449 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 MYO1AQ9UBC5 1043 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CDC23Q9UJX2 597 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 WWC3Q9ULE0 1092 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 KCNJ14Q9UNX9 436 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 RIPOR2Q9Y4F9 1068 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 ADGRG1Q9Y653 693 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 CACNA1FO60840 1977 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 KCPQ6ZWJ8 1503 aa3.99□□□□□ -1.77
COL8A1-204ENST00000462604 TRPM3Q9HCF6 1732 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 SPATA31A3Q5VYP0 1347 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 ZNF142P52746 1687 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 H3BQF6 201 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 TULP2O00295 520 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 N4BP3O15049 544 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PDE8AO60658 829 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PDE8BO95263 885 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 FECHP22830 423 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 GPTP24298 496 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 GUCY1A2P33402 732 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PBX1P40424 430 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 AFMP43652 599 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PHKA1P46020 1223 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 TOB1P50616 345 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CTDSPL2Q05D32 466 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CKAP4Q07065 602 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RBL2Q08999 1139 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RAD51AP2Q09MP3 1159 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PAK1Q13153 545 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 STIM1Q13586 685 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CUL4BQ13620 913 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 MTF1Q14872 753 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PTPN21Q16825 1174 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 TSR1Q2NL82 804 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 MAP9Q49MG5 647 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 IQCEQ6IPM2 695 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RAD9BQ6WBX8 426 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RASGRP2Q7LDG7 609 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 SH3RF1Q7Z6J0 888 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CATIPQ7Z7H3 387 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 NLRP10Q86W26 655 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 FOXP4Q8IVH2 680 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 DNAJC10Q8IXB1 793 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 ZNF654Q8IZM8 581 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 MAGEB6Q8N7X4 407 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 VGLL2Q8N8G2 317 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 IQUBQ8NA54 791 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 FANCBQ8NB91 859 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 MSANTD4Q8NCY6 345 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 FAM71BQ8TC56 605 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CABLES1Q8TDN4 633 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CPLX3Q8WVH0 158 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 SYMPKQ92797 1274 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 ARHGEF1Q92888 912 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PAGE5Q96GU1 130 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CARD10Q9BWT7 1032 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RNF26Q9BY78 433 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 FUT8Q9BYC5 575 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RASSF4Q9H2L5 321 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 GREM2Q9H772 168 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 ZSWIM4Q9H7M6 989 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 ARMT1Q9H993 441 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 SENP2Q9HC62 589 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CABP5Q9NP86 173 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 MED4Q9NPJ6 270 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 STRN4Q9NRL3 753 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 WDR70Q9NW82 654 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 ZSWIM5Q9P217 1185 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 VPS18Q9P253 973 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 ADD3Q9UEY8 706 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 LIMA1Q9UHB6 759 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PUF60Q9UHX1 559 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 TRMT112Q9UI30 125 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RWDD2AQ9UIY3 292 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RAB21Q9UL25 225 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 DENND2AQ9ULE3 1009 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 IQSEC3Q9UPP2 1182 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 CTNND2Q9UQB3 1225 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PCDHB6Q9Y5E3 794 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 SLC4A4Q9Y6R1 1079 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 SIPA1L3O60292 1781 aaPredicted RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 PARP4Q9UKK3 1724 aaKnown RBP3.98□□□□□ -1.77
COL8A1-204ENST00000462604 KIF13AQ9H1H9 1805 aa3.98□□□□□ -1.77
COL8A1-204ENST00000462604 RGPD8O14715 1765 aaPredicted RBP3.97□□□□□ -1.77
COL8A1-204ENST00000462604 MAGEB6P1A0A0J9YX57 407 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 GSG1L2A8MUP6 293 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 ERVV-1B6SEH8 477 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 KCNJ18B7U540 433 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 PPP1R3GB7ZBB8 358 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 MAP2K7O14733 419 aa3.97□□□□□ -1.77
COL8A1-204ENST00000462604 TEX33O43247 280 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms