RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 DNAJC18Q9H819 358 aa14.32□□□□□ -0.12
PCCB-203ENST00000462542 AATFQ9NY61 560 aaKnown RBP eCLIP14.32□□□□□ -0.12
PCCB-203ENST00000462542 PALD1Q9ULE6 856 aa14.32□□□□□ -0.12
PCCB-203ENST00000462542 NOB1Q9ULX3 412 aaKnown RBP14.32□□□□□ -0.12
PCCB-203ENST00000462542 STRNO43815 780 aa14.31□□□□□ -0.12
PCCB-203ENST00000462542 CNMDO75829 334 aa14.31□□□□□ -0.12
PCCB-203ENST00000462542 MCAMP43121 646 aa14.31□□□□□ -0.12
PCCB-203ENST00000462542 WDR78Q5VTH9 848 aa14.31□□□□□ -0.12
PCCB-203ENST00000462542 MAPKAPK5Q8IW41 473 aa14.31□□□□□ -0.12
PCCB-203ENST00000462542 ATP11BQ9Y2G3 1177 aa14.31□□□□□ -0.12
PCCB-203ENST00000462542 TMEM265A0A087WTH1 108 aa14.3□□□□□ -0.12
PCCB-203ENST00000462542 KBTBD13C9JR72 458 aa14.3□□□□□ -0.12
PCCB-203ENST00000462542 IGHA2P01877 340 aa14.3□□□□□ -0.12
PCCB-203ENST00000462542 CT47B1P0C2W7 299 aaPredicted RBP14.3□□□□□ -0.12
PCCB-203ENST00000462542 G3BP1Q13283 466 aaKnown RBP eCLIP14.3□□□□□ -0.123e-6■■■□□ 18
PCCB-203ENST00000462542 GRB14Q14449 540 aa14.3□□□□□ -0.12
PCCB-203ENST00000462542 CERS3Q8IU89 383 aa14.3□□□□□ -0.12
PCCB-203ENST00000462542 MEIS3Q99687 375 aa14.3□□□□□ -0.12
PCCB-203ENST00000462542 FLT1P17948 1338 aa14.3□□□□□ -0.12
PCCB-203ENST00000462542 GH2P01242 217 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 CYP2C19P33261 490 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 C9orf50Q5SZB4 431 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 GJC2Q5T442 439 aaPredicted RBP14.29□□□□□ -0.12
PCCB-203ENST00000462542 C1orf53Q5VUE5 145 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 OLFML2BQ68BL8 750 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 TATDN1Q6P1N9 297 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 DPP9Q86TI2 863 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 BADQ92934 168 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 FEZ1Q99689 392 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 KIAA1683Q9H0B3 1180 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 NDUFB9Q9Y6M9 179 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 MAST2Q6P0Q8 1798 aa14.29□□□□□ -0.12
PCCB-203ENST00000462542 SEPT4O43236 478 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 CYBAP13498 195 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 SNX17Q15036 470 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 SHROOM1Q2M3G4 852 aaPredicted RBP14.28□□□□□ -0.12
PCCB-203ENST00000462542 FRMPD3Q5JV73 1810 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 CCDC158Q5M9N0 1113 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 TRPV1Q8NER1 839 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 NPLOC4Q8TAT6 608 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 MYLIPQ8WY64 445 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 SLC5A4Q9NY91 659 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 HOXC10Q9NYD6 342 aa14.28□□□□□ -0.12
PCCB-203ENST00000462542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.28□□□□□ -0.12
PCCB-203ENST00000462542 SIPA1L1O43166 1804 aa14.27□□□□□ -0.12
PCCB-203ENST00000462542 FOSL2P15408 326 aa14.27□□□□□ -0.13
PCCB-203ENST00000462542 ARHGAP45Q92619 1136 aa14.27□□□□□ -0.13
PCCB-203ENST00000462542 TTYH1Q9H313 450 aaPredicted RBP14.27□□□□□ -0.13
PCCB-203ENST00000462542 CABP5Q9NP86 173 aa14.27□□□□□ -0.13
PCCB-203ENST00000462542 GPR108Q9NPR9 543 aa14.27□□□□□ -0.13
PCCB-203ENST00000462542 PRDM5Q9NQX1 630 aaPredicted RBP14.27□□□□□ -0.13
PCCB-203ENST00000462542 BTBD7Q9P203 1132 aa14.27□□□□□ -0.13
PCCB-203ENST00000462542 SAP30BPQ9UHR5 308 aaKnown RBP14.27□□□□□ -0.13
PCCB-203ENST00000462542 TACC3Q9Y6A5 838 aa14.27□□□□□ -0.13
PCCB-203ENST00000462542 RLFQ13129 1914 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 CYP2E1P05181 493 aaPredicted RBP14.26□□□□□ -0.13
PCCB-203ENST00000462542 VCAM1P19320 739 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 COG2Q14746 738 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 ZYXQ15942 572 aaKnown RBP14.26□□□□□ -0.13
PCCB-203ENST00000462542 CERKLQ49MI3 558 aaPredicted RBP14.26□□□□□ -0.13
PCCB-203ENST00000462542 TTC39AQ5SRH9 613 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 TTC6Q86TZ1 520 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 TRMT2AQ8IZ69 625 aaKnown RBP14.26□□□□□ -0.13
PCCB-203ENST00000462542 ZNF512BQ96KM6 892 aaPredicted RBP14.26□□□□□ -0.13
PCCB-203ENST00000462542 EHD4Q9H223 541 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 SNRKQ9NRH2 765 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 SERPINB13Q9UIV8 391 aa14.26□□□□□ -0.13
PCCB-203ENST00000462542 LTBP2Q14767 1821 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 SPDYE16A6NNV3 312 aaPredicted RBP14.25□□□□□ -0.13
PCCB-203ENST00000462542 ADORA2AP29274 412 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 ADCYAP1R1P41586 468 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 ABCB5Q2M3G0 1257 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 TRIM60Q495X7 471 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 TMED8Q6PL24 325 aaPredicted RBP14.25□□□□□ -0.13
PCCB-203ENST00000462542 ADGRA1Q86SQ6 560 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 ABRAQ8N0Z2 381 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 SHCBP1Q8NEM2 672 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 PDLIM7Q9NR12 457 aa14.25□□□□□ -0.13
PCCB-203ENST00000462542 CDH23Q9H251 3354 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 TRIM43BA6NCK2 446 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 GNAI2P04899 355 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 USP5P45974 858 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 TLE2Q04725 743 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 LRRC41Q15345 812 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 TJAP1Q5JTD0 557 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 TRIM43Q96BQ3 446 aaPredicted RBP14.24□□□□□ -0.13
PCCB-203ENST00000462542 MOV10L1Q9BXT6 1211 aaKnown RBP14.24□□□□□ -0.13
PCCB-203ENST00000462542 MROH8Q9H579 483 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 RPAP3Q9H6T3 665 aaPredicted RBP14.24□□□□□ -0.13
PCCB-203ENST00000462542 NRBP1Q9UHY1 535 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 FOCADQ5VW36 1801 aa14.24□□□□□ -0.13
PCCB-203ENST00000462542 CDK5RAP2Q96SN8 1893 aa14.23□□□□□ -0.13
PCCB-203ENST00000462542 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.23□□□□□ -0.13
PCCB-203ENST00000462542 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.23□□□□□ -0.13
PCCB-203ENST00000462542 TNFRSF10AO00220 468 aa14.23□□□□□ -0.13
PCCB-203ENST00000462542 MYCNP04198 464 aaPredicted RBP14.23□□□□□ -0.13
PCCB-203ENST00000462542 CYP7A1P22680 504 aa14.23□□□□□ -0.13
PCCB-203ENST00000462542 DYNLL1P63167 89 aaKnown RBP14.23□□□□□ -0.13
PCCB-203ENST00000462542 SH3RF1Q7Z6J0 888 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms