RNA–Protein interactions for RNA: ENST00000462279.5

ERCC8-204, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 3,424 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-204ENST00000462279 N4BP2L2Q92802 583 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 CTNND2Q9UQB3 1225 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 ZC3H4Q9UPT8 1303 aaKnown RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 PIK3C2AO00443 1686 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 MACROD2A1Z1Q3 448 aa9.09□□□□□ -0.95
ERCC8-204ENST00000462279 SHOX2O60902 331 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 SAFBQ15424 915 aaKnown RBP eCLIP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 MB21D2Q8IYB1 491 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 CMTR1Q8N1G2 835 aaKnown RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 ZNF622Q969S3 477 aaKnown RBP eCLIP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 ZNF594Q96JF6 807 aaPredicted RBP9.09□□□□□ -0.95
ERCC8-204ENST00000462279 CDKL5O76039 1030 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 NF2P35240 595 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 RFX5P48382 616 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 PPARAQ07869 468 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 EZH2Q15910 746 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 CCDC70Q6NSX1 233 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 PLPPR3Q6T4P5 718 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 CCNI2Q6ZMN8 369 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 APTXQ7Z2E3 356 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 HDAC7Q8WUI4 952 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 ARL8AQ96BM9 186 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 CTAGE1Q96RT6 745 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 ESF1Q9H501 851 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 PCDHB6Q9Y5E3 794 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 RGPD8O14715 1765 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 UTYO14607 1347 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 ZMYM6O95789 1325 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 RNMTO43148 476 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 NDUFA10O95299 355 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 ERCC5P28715 1186 aaPredicted RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 NR5A1Q13285 461 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 TSR1Q2NL82 804 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 ANKRD13DQ6ZTN6 518 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 TRAPPC11Q7Z392 1133 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 NOSTRINQ8IVI9 506 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 DIS3L2Q8IYB7 885 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 CNPY4Q8N129 248 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 MYO1AQ9UBC5 1043 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 ANGEL1Q9UNK9 670 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 GOLGA8AA7E2F4 631 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 B4E1Z4 1266 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 ZBTB43O43298 467 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 KIF1CO43896 1103 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 AKAP4Q5JQC9 854 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 PRPF38AQ8NAV1 312 aaKnown RBP9.08□□□□□ -0.96
ERCC8-204ENST00000462279 NKX2-3Q8TAU0 364 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 EEF2KMTQ96G04 330 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 EPSTI1Q96J88 318 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 CSRNP2Q9H175 543 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
ERCC8-204ENST00000462279 GRIN2DO15399 1336 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 PDE2AO00408 941 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 IDEP14735 1019 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 GPTP24298 496 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 SARSP49591 514 aaKnown RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 HDGFP51858 240 aaKnown RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 UBXN1Q04323 297 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 KRT31Q15323 416 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 NBPF14Q5TI25 921 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 GPIHBP1Q8IV16 184 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 INCENPQ9NQS7 918 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 FAM237AA0A1B0GTK4 181 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 NEBLO76041 1014 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 CDR1P51861 262 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 NEDD9Q14511 834 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 APOA5Q6Q788 366 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 PI16Q6UXB8 463 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 B4GALNT4Q76KP1 1039 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 KIRREL3Q8IZU9 778 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 CCDC85AQ96PX6 553 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 METTL22Q9BUU2 404 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 PUS7LQ9H0K6 701 aaKnown RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 BLZF1Q9H2G9 400 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 REXO2Q9Y3B8 237 aaKnown RBP9.07□□□□□ -0.96
ERCC8-204ENST00000462279 DUSP10Q9Y6W6 482 aa9.07□□□□□ -0.96
ERCC8-204ENST00000462279 LMO7Q8WWI1 1683 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 MEFVO15553 781 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 RANBP6O60518 1105 aaKnown RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 ATP2C2O75185 946 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 KRT14P02533 472 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 GUCY1A2P33402 732 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 TOB1P50616 345 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 GUCY1A3Q02108 690 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 CKAP4Q07065 602 aaKnown RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 IFT88Q13099 833 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 LRRC24Q50LG9 513 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 TRIML1Q8N9V2 468 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 ZKSCAN4Q969J2 545 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 CCDC51Q96ER9 411 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 DMGDHQ9UI17 866 aaKnown RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 FBXO2Q9UK22 296 aaPredicted RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 FAM184BQ9ULE4 1060 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 ODF2LQ9ULJ1 636 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 RFX7Q2KHR2 1363 aa9.06□□□□□ -0.96
ERCC8-204ENST00000462279 ACTN4O43707 911 aaKnown RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 IPO7O95373 1038 aaKnown RBP9.06□□□□□ -0.96
ERCC8-204ENST00000462279 PTPREP23469 700 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms