RNA–Protein interactions for RNA: ENST00000461778.5

NR1H3-215, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 5

Gene NR1H3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-215ENST00000461778 TFAP4Q01664 338 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 KIF23Q02241 960 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-215ENST00000461778 FAM47AQ5JRC9 791 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 KRT40Q6A162 431 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 OTUD7BQ6GQQ9 843 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 LRSAM1Q6UWE0 723 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 CCDC144CPQ8IYA2 1237 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 DYNLL2Q96FJ2 89 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 RNF26Q9BY78 433 aaPredicted RBP15.21■□□□□ 0.03
NR1H3-215ENST00000461778 ZNF287Q9HBT7 754 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 IL17RBQ9NRM6 502 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 RTEL1Q9NZ71 1219 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 ZNRF3Q9ULT6 936 aa15.21■□□□□ 0.03
NR1H3-215ENST00000461778 USP17L3A6NCW0 530 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 USP17L4A6NCW7 530 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 TSPY2A6NKD2 308 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 PRPF3O43395 683 aaKnown RBP15.2■□□□□ 0.02
NR1H3-215ENST00000461778 ECE2O60344 883 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 LETM1O95202 739 aaPredicted RBP15.2■□□□□ 0.02
NR1H3-215ENST00000461778 DEXIO95424 95 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 XRCC6P12956 609 aaKnown RBP eCLIP15.2■□□□□ 0.02
NR1H3-215ENST00000461778 RASA1P20936 1047 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 NOVP48745 357 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 CDK8P49336 464 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 FOSBP53539 338 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 EAPPQ56P03 285 aaPredicted RBP15.2■□□□□ 0.02
NR1H3-215ENST00000461778 CCDC183Q5T5S1 534 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 APOBEC3HQ6NTF7 200 aaKnown RBP15.2■□□□□ 0.02
NR1H3-215ENST00000461778 USP17L1Q7RTZ2 530 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 ZNF444Q8N0Y2 327 aaPredicted RBP15.2■□□□□ 0.02
NR1H3-215ENST00000461778 PGBD1Q96JS3 809 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 AIFM3Q96NN9 605 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 USP28Q96RU2 1077 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 MXD3Q9BW11 206 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 SLC26A6Q9BXS9 759 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 DBNDD1Q9H9R9 158 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 GRPEL1Q9HAV7 217 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 KCNQ5Q9NR82 932 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 ADAMTSL1Q8N6G6 1762 aa15.2■□□□□ 0.02
NR1H3-215ENST00000461778 NPM3O75607 178 aaKnown RBP15.19■□□□□ 0.02
NR1H3-215ENST00000461778 WDHD1O75717 1129 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-215ENST00000461778 U2AF2P26368 475 aaKnown RBP eCLIP15.19■□□□□ 0.02
NR1H3-215ENST00000461778 LMOD1P29536 600 aaPredicted RBP15.19■□□□□ 0.02
NR1H3-215ENST00000461778 GABPAQ06546 454 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 NEDD1Q8NHV4 660 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 NUP133Q8WUM0 1156 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 KLRG1Q96E93 195 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 MKNK2Q9HBH9 465 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 GJB4Q9NTQ9 266 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 SAP30BPQ9UHR5 308 aaKnown RBP15.19■□□□□ 0.02
NR1H3-215ENST00000461778 CLEC11AQ9Y240 323 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 SCN4AP35499 1836 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 MYH8P13535 1937 aa15.19■□□□□ 0.02
NR1H3-215ENST00000461778 KIF28PB7ZC32 967 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 NMT2O60551 498 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 CRKP46108 304 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 CXCL9Q07325 125 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 MYSM1Q5VVJ2 828 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 CDC42EP5Q6NZY7 148 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 TMTC3Q6ZXV5 915 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 FBXW7Q969H0 707 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 USP40Q9NVE5 1235 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 TAOK2Q9UL54 1235 aa15.18■□□□□ 0.02
NR1H3-215ENST00000461778 YEATS4O95619 227 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 GUCY1A2P33402 732 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 EPS15P42566 896 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 NASPP49321 788 aaPredicted RBP15.17■□□□□ 0.02
NR1H3-215ENST00000461778 TNIP1Q15025 636 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 PKN1Q16512 942 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 CIAPIN1Q6FI81 312 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.17■□□□□ 0.02
NR1H3-215ENST00000461778 DDX4Q9NQI0 724 aaKnown RBP15.17■□□□□ 0.02
NR1H3-215ENST00000461778 POLR3EQ9NVU0 708 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 SERPINA10Q9UK55 444 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 MYO3BQ8WXR4 1341 aa15.17■□□□□ 0.02
NR1H3-215ENST00000461778 COL4A5P29400 1685 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 GREB1LQ9C091 1923 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-215ENST00000461778 SYCE3A1L190 88 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 F8W031 263 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-215ENST00000461778 UBE2Q2LH0YL09 131 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 ITGBL1O95965 494 aaPredicted RBP15.16■□□□□ 0.02
NR1H3-215ENST00000461778 TSPY3P0CV98 308 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 TSPY8P0CW00 308 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 LIG1P18858 919 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 SCNN1DP51172 638 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 TRIM29Q14134 588 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 LINC00301Q8NCQ3 95 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 SLC44A5Q8NCS7 719 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 IDI2Q9BXS1 227 aa15.16■□□□□ 0.02
NR1H3-215ENST00000461778 PLIN4Q96Q06 1357 aa15.15■□□□□ 0.02
NR1H3-215ENST00000461778 YDJCA8MPS7 323 aa15.15■□□□□ 0.02
NR1H3-215ENST00000461778 PLEKHA8P1O95397 391 aa15.15■□□□□ 0.02
NR1H3-215ENST00000461778 MMP1P03956 469 aa15.15■□□□□ 0.02
NR1H3-215ENST00000461778 GRM4Q14833 912 aa15.15■□□□□ 0.02
NR1H3-215ENST00000461778 USP50Q70EL3 339 aaPredicted RBP15.15■□□□□ 0.02
NR1H3-215ENST00000461778 SRBD1Q8N5C6 995 aaKnown RBP15.15■□□□□ 0.02
NR1H3-215ENST00000461778 JMYQ8N9B5 988 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms