RNA–Protein interactions for RNA: ENST00000461660.1

ATP13A3-206, Transcript of ATPase 13A3, humanhuman

TSL 1 (best)

Gene ATP13A3, Length 3,517 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-206ENST00000461660 BMP15O95972 392 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 TXLNAP40222 546 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 MRE11P49959 708 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 PLCD1P51178 756 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 EVCP57679 992 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 ICA1Q05084 483 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 COL9A3Q14050 684 aaPredicted RBP4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 CLEC17AQ6ZS10 378 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 C16orf86Q6ZW13 317 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 LEO1Q8WVC0 666 aaPredicted RBP4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 TSPY26PQ9H489 355 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 SH2D4AQ9H788 454 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 ARHGEF10LQ9HCE6 1279 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 GPCPD1Q9NPB8 672 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 SBF2Q86WG5 1849 aa4.74□□□□□ -1.65
ATP13A3-206ENST00000461660 SYCE3A1L190 88 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 KLRF2D3W0D1 207 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 SPTLC2O15270 562 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 TTLL1O95922 423 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 SLC1A4P43007 532 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 MAP3K11Q16584 847 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ABCB5Q2M3G0 1257 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 RILPL1Q5EBL4 403 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 MYSM1Q5VVJ2 828 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 TMTC3Q6ZXV5 915 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ZNF384Q8TF68 577 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 HOOK2Q96ED9 719 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 VPS33BQ9H267 617 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 SENP2Q9HC62 589 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 VPS54Q9P1Q0 977 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 KCNJ14Q9UNX9 436 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 HPS5Q9UPZ3 1129 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ZBTB12Q9Y330 459 aaPredicted RBP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ZBTB22O15209 634 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ENTPD3O75355 529 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 CCDC192P0DO97 292 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 SCG2P13521 617 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 RASA1P20936 1047 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 CDC27P30260 824 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 RHBDL3P58872 404 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 TPM4P67936 248 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ST3GAL1Q11201 340 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 TRAF1Q13077 416 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 RESTQ13127 1097 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ANO1Q5XXA6 986 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 RNF214Q8ND24 703 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 AGBL3Q8NEM8 1001 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 CEP95Q96GE4 821 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 AIFM3Q96NN9 605 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 TMEM47Q9BQJ4 181 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 KANSL2Q9H9L4 492 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 C6orf50Q9HD87 102 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 DDX60Q8IY21 1712 aaKnown RBP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 C10orf71Q711Q0 1435 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 BECN2A8MW95 431 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 WDHD1O75717 1129 aaPredicted RBP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 PLEKHA8P1O95397 391 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 CTDNEP1O95476 244 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 YEATS4O95619 227 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 GOLGA8HP0CJ92 632 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 GNA11P29992 359 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 NASPP49321 788 aaPredicted RBP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 NFIAQ12857 509 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ZSCAN23Q3MJ62 389 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 ASPRV1Q53RT3 343 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 TMEM179Q6ZVK1 233 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 CCAR1Q8IX12 1150 aaKnown RBP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 MRPS27Q92552 414 aaKnown RBP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 UPF1Q92900 1129 aaKnown RBP eCLIP4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 USP28Q96RU2 1077 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 KCNQ5Q9NR82 932 aa4.73□□□□□ -1.65
ATP13A3-206ENST00000461660 UBR3Q6ZT12 1888 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 COL24A1Q17RW2 1714 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 FAM196BA6NMK8 535 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GOLGA6L19H0YKK7 550 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 CTAGE5O15320 804 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 PRPF3O43395 683 aaKnown RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 AKR1B1P15121 316 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 RPS12P25398 132 aaKnown RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 KIF23Q02241 960 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 CXCL9Q07325 125 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 SEC23AQ15436 765 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GPATCH4Q5T3I0 446 aaKnown RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 APOBEC3HQ6NTF7 200 aaKnown RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 NOSTRINQ8IVI9 506 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 MRIQ9BWK5 157 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 DACT1Q9NYF0 836 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 C4AP0C0L4 1744 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 LAMB2P55268 1798 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 TAF1LQ8IZX4 1826 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 BTBD18B2RXH4 712 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GADD45BO75293 160 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GDF11O95390 407 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 MARCKSP29966 332 aaPredicted RBP4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GRM4Q14833 912 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 GPR162Q16538 588 aa4.72□□□□□ -1.65
ATP13A3-206ENST00000461660 CAMK4Q16566 473 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms