RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 SLC4A3P48751 1232 aa17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 RGS19P49795 217 aa17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 PPIL2Q13356 520 aa17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 RRP12Q5JTH9 1297 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 NOL9Q5SY16 702 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 C12orf60Q5U649 245 aa17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 NOL8Q76FK4 1167 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 ESR2Q92731 530 aa17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 NBPF3Q9H094 633 aa17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 ZCCHC17Q9NP64 241 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
TMEM39A-203ENST00000461654 CYP2D7A0A087X1C5 515 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 CCL15-CCL14A0A0B4J2E2 113 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 PRC1O43663 620 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 CETPP11597 493 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 EXOSC10Q01780 885 aaKnown RBP17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 CRHR2Q13324 411 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 SART3Q15020 963 aaKnown RBP17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 CCL15Q16663 113 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 Q6ZUG5 572 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 SH3BP5LQ7L8J4 393 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 MB21D2Q8IYB1 491 aaPredicted RBP17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 STK11IPQ8N1F8 1099 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 LAMA4Q16363 1823 aa17.86■□□□□ 0.45
TMEM39A-203ENST00000461654 PHF20L1A8MW92 1017 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 B4E1Z4 1266 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 IRF6O14896 467 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 TBC1D12O60347 775 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 HLA-DOAP06340 250 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 NEDD4P46934 1319 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 SNAPC2Q13487 334 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 TCEANC2Q96MN5 208 aa17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 DDX4Q9NQI0 724 aaKnown RBP17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 SH2B1Q9NRF2 756 aaPredicted RBP17.85■□□□□ 0.45
TMEM39A-203ENST00000461654 ERICH2A1L162 156 aa17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 DDTLA6NHG4 134 aaPredicted RBP17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 ORC4O43929 436 aa17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 KDM4AO75164 1064 aa17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 CYP2D6P10635 497 aa17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 TMEM87BQ96K49 555 aa17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 OSBPL5Q9H0X9 879 aaPredicted RBP17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 DHX36Q9H2U1 1008 aaKnown RBP17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 MKNK2Q9HBH9 465 aa17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 KCNH4Q9UQ05 1017 aa17.84■□□□□ 0.45
TMEM39A-203ENST00000461654 COL2A1P02458 1487 aaPredicted RBP17.83■□□□□ 0.45
TMEM39A-203ENST00000461654 RANBP6O60518 1105 aaKnown RBP17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 SLC4A8Q2Y0W8 1093 aa17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 FBXO46Q6PJ61 603 aaPredicted RBP17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 ZSCAN29Q8IWY8 852 aaPredicted RBP17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 FAM43AQ8N2R8 423 aa17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 BRF1Q92994 677 aa17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 TMX3Q96JJ7 454 aa17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 UBAC1Q9BSL1 405 aa17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 MTA3Q9BTC8 594 aa17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 ZFYVE28Q9HCC9 887 aa17.83■□□□□ 0.44
TMEM39A-203ENST00000461654 NAV1Q8NEY1 1877 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 ROBO3Q96MS0 1386 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 FGRP09769 529 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 CHST3Q7LGC8 479 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 ZNF444Q8N0Y2 327 aaPredicted RBP17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 FBXL16Q8N461 479 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 CHMP4CQ96CF2 233 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 ERO1AQ96HE7 468 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 TRIM34Q9BYJ4 488 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 LRRC2Q9BYS8 371 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 INCENPQ9NQS7 918 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 TAOK2Q9UL54 1235 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 HPS5Q9UPZ3 1129 aa17.82■□□□□ 0.44
TMEM39A-203ENST00000461654 BTBD19C9JJ37 291 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 CXCL11O14625 94 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 IFIT3O14879 490 aaKnown RBP17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 CTNND1O60716 968 aaKnown RBP17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 SP3Q02447 781 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 TOB2Q14106 344 aaPredicted RBP17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 TAF1CQ15572 869 aaPredicted RBP17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 TMEM67Q5HYA8 995 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 IQCA1Q86XH1 822 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 SCYL3Q8IZE3 742 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 SPRYD3Q8NCJ5 442 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 ZSWIM5Q9P217 1185 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 SWAP70Q9UH65 585 aa17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.81■□□□□ 0.44
TMEM39A-203ENST00000461654 TSPY2A6NKD2 308 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 PRDM1O75626 825 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 PLCD1P51178 756 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 ANTXR2P58335 489 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 CCDC178Q5BJE1 867 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 NFXL1Q6ZNB6 911 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 C16orf86Q6ZW13 317 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 CYB5R4Q7L1T6 521 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 ANKRD23Q86SG2 305 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 TMTC2Q8N394 836 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 CRACR2BQ8N4Y2 399 aaPredicted RBP17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 DYNLL2Q96FJ2 89 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 LARP6Q9BRS8 491 aaKnown RBP17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 AGXT2Q9BYV1 514 aa17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 NAP1L2Q9ULW6 460 aaPredicted RBP17.8■□□□□ 0.44
TMEM39A-203ENST00000461654 BAZ2AQ9UIF9 1905 aaKnown RBP17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 TLR2O60603 784 aa17.79■□□□□ 0.44
TMEM39A-203ENST00000461654 MOGSQ13724 837 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms