RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZYXQ15942 572 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 USP17L2Q6R6M4 530 aa12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 CTU1Q7Z7A3 348 aaKnown RBP12.62□□□□□ -0.39
TRAPPC12-213ENST00000461577 ROBO3Q96MS0 1386 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 CYP2C8P10632 490 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 GUCY1A2P33402 732 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 PDE4BQ07343 736 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 PPARAQ07869 468 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 TREML2Q5T2D2 321 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 VPS53Q5VIR6 699 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 ZNF589Q86UQ0 364 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 ZNF444Q8N0Y2 327 aaPredicted RBP12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 ARHGEF10LQ9HCE6 1279 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 CPA4Q9UI42 421 aa12.61□□□□□ -0.39
TRAPPC12-213ENST00000461577 HSPD1P10809 573 aaKnown RBP12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 IRX3P78415 501 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 ICA1Q05084 483 aa12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 KIF22Q14807 665 aa12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 ARHGEF6Q15052 776 aa12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 ALX1Q15699 326 aa12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 ACER1Q8TDN7 264 aa12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 SMCR8Q8TEV9 937 aaPredicted RBP12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 MCOLN1Q9GZU1 580 aa12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 KIAA1683Q9H0B3 1180 aa12.6□□□□□ -0.39
TRAPPC12-213ENST00000461577 FOXP2O15409 715 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 PRDM1O75626 825 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 RASA1P20936 1047 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 ATP2B2Q01814 1243 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 C17orf99Q6UX52 265 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 RUFY2Q8WXA3 655 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 SH2D4AQ9H788 454 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 KANSL2Q9H9L4 492 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 EMILIN3Q9NT22 766 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 TRIM17Q9Y577 477 aa12.59□□□□□ -0.39
TRAPPC12-213ENST00000461577 FGAP02671 866 aa12.58□□□□□ -0.4
TRAPPC12-213ENST00000461577 CTDSPL2Q05D32 466 aa12.58□□□□□ -0.4
TRAPPC12-213ENST00000461577 PKN2Q16513 984 aaKnown RBP12.58□□□□□ -0.4
TRAPPC12-213ENST00000461577 C12orf42Q96LP6 360 aa12.58□□□□□ -0.4
TRAPPC12-213ENST00000461577 ASCC2Q9H1I8 757 aaPredicted RBP12.58□□□□□ -0.4
TRAPPC12-213ENST00000461577 EFCC1Q9HA90 598 aa12.58□□□□□ -0.4
TRAPPC12-213ENST00000461577 ADGRA2Q96PE1 1338 aa12.58□□□□□ -0.4
TRAPPC12-213ENST00000461577 A0A1W2PRG0 241 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L15C9J2P7 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L13C9JLJ4 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L11C9JVI0 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L18D6R9N7 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L22D6RA61 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L17D6RBQ6 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L19D6RCP7 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L20D6RJB6 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 ECM2O94769 699 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 TSPY3P0CV98 308 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 TSPY8P0CW00 308 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 EEF2P13639 858 aaKnown RBP12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 CHMLP26374 656 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 GCLCP48506 637 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 LACTBP83111 547 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 USP17L24Q0WX57 530 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 OTOP1Q7RTM1 612 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 CLEC10AQ8IUN9 316 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 TOMM22Q9NS69 142 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 ANAPC4Q9UJX5 808 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 ZMYM6O95789 1325 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 RAD50Q92878 1312 aa12.57□□□□□ -0.4
TRAPPC12-213ENST00000461577 GREB1LQ9C091 1923 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 RAD21O60216 631 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 BCRP11274 1271 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 VCAM1P19320 739 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 HAND2P61296 217 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 TFAP4Q01664 338 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 FAM47AQ5JRC9 791 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 FBXO46Q6PJ61 603 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 SKAP1Q86WV1 359 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 ANKRD13CQ8N6S4 541 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 ABHD8Q96I13 439 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 P2RX7Q99572 595 aaKnown RBP12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 DSCC1Q9BVC3 393 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 RPAP3Q9H6T3 665 aaPredicted RBP12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 GOPCQ9HD26 462 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 PPP4R2Q9NY27 417 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 TMX2Q9Y320 296 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 MYH4Q9Y623 1939 aa12.56□□□□□ -0.4
TRAPPC12-213ENST00000461577 MGAMO43451 1857 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 TSPY2A6NKD2 308 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 ZNF213O14771 459 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 RANBP6O60518 1105 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 FMNL1O95466 1100 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 PSMC4P43686 418 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 HERVK_113P62684 666 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 RRP12Q5JTH9 1297 aaKnown RBP12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 CATSPERGQ6ZRH7 1159 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 SIAH1Q8IUQ4 282 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 NEDD1Q8NHV4 660 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 GTF3C2Q8WUA4 911 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 LPAR1Q92633 364 aa12.55□□□□□ -0.4
TRAPPC12-213ENST00000461577 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms