RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 ADGRB3O60242 1522 aa6.75□□□□□ -1.33
ATPAF1-203ENST00000460928 NLRP1Q9C000 1473 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 AOC2O75106 756 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 RAB6AP20340 208 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 ZEB1P37275 1124 aaPredicted RBP6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 COL19A1Q14993 1142 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 SLC26A8Q96RN1 970 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 WDR18Q9BV38 432 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 C1GALT1Q9NS00 363 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 SLC52A1Q9NWF4 448 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 AP4E1Q9UPM8 1137 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 RIMS2Q9UQ26 1411 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 NEURL4Q96JN8 1562 aa6.74□□□□□ -1.33
ATPAF1-203ENST00000460928 TMEM2Q9UHN6 1383 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 GPR182O15218 404 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 EIF5BO60841 1220 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 ASPAP45381 313 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 ZNF765Q7L2R6 523 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 THEMISQ8N1K5 641 aaPredicted RBP6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 CCDC74AQ96AQ1 378 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 ALKBH8Q96BT7 664 aaKnown RBP6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 RBCK1Q9BYM8 510 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 CCDC144AA2RUR9 1427 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 SPATA31E1Q6ZUB1 1445 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 KIF1BO60333 1816 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 SETBP1Q9Y6X0 1596 aa6.73□□□□□ -1.33
ATPAF1-203ENST00000460928 LRRC7Q96NW7 1537 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 TMEM238LA0A1B0GVL6 79 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 EIF1AYO14602 144 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 VAMP1P23763 118 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 EAPPQ56P03 285 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 TMC7Q7Z402 723 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 ANKLE2Q86XL3 938 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 AGBL5Q8NDL9 886 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 DMRTB1Q96MA1 342 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 ZC3H7BQ9UGR2 993 aaKnown RBP6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 TRAK1Q9UPV9 953 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 ZFYVE9O95405 1425 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 POLR1AO95602 1720 aaPredicted RBP6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 ADGRF5Q8IZF2 1346 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 ARHGAP23Q9P227 1491 aa6.72□□□□□ -1.33
ATPAF1-203ENST00000460928 ITGB5P18084 799 aa6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 PDE3AQ14432 1141 aa6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 OGFOD3Q6PK18 319 aa6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 TP53INP2Q8IXH6 220 aa6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 GLIS3Q8NEA6 775 aa6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 PAK6Q9NQU5 681 aaPredicted RBP6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 PPP1R9AQ9ULJ8 1098 aa6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 SCAF11Q99590 1463 aaKnown RBP6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 NEXMIFQ5QGS0 1516 aa6.71□□□□□ -1.34
ATPAF1-203ENST00000460928 NPHP4O75161 1426 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 TMPRSS2O15393 492 aa6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 DYNC1LI2O43237 492 aaPredicted RBP6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 TCF3P15923 654 aa6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 HNRNPUQ00839 825 aaKnown RBP eCLIP6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 KRT82Q9NSB4 513 aa6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 CRIM1Q9NZV1 1036 aa6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 DAGLAQ9Y4D2 1042 aa6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 SLIT1O75093 1534 aa6.7□□□□□ -1.34
ATPAF1-203ENST00000460928 STRCP1A6NGW2 1772 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 IQGAP1P46940 1657 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 GADD45BO75293 160 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 JUNBP17275 347 aaPredicted RBP6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 FAAP100Q0VG06 881 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 GRM2Q14416 872 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 TMEM132EQ6IEE7 984 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 FLCNQ8NFG4 579 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 TMC1Q8TDI8 760 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 CSRNP1Q96S65 589 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 NIF3L1Q9GZT8 377 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 CCDC86Q9H6F5 360 aaKnown RBP6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 LRRC4CQ9HCJ2 640 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 EID1Q9Y6B2 187 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 PPLO60437 1756 aa6.69□□□□□ -1.34
ATPAF1-203ENST00000460928 NRXN3Q9Y4C0 1643 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 IFT172Q9UG01 1749 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 P4HBP07237 508 aaKnown RBP6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 SLFN14P0C7P3 912 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 PLCB3Q01970 1234 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 FZD5Q13467 585 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 KIF4BQ2VIQ3 1234 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 CYP27C1Q4G0S4 372 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 STK11IPQ8N1F8 1099 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 ASIC4Q96FT7 647 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 ANP32EQ9BTT0 268 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 ATXN3LQ9H3M9 355 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 USP35Q9P2H5 1018 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 PCDHGC5Q9Y5F6 944 aa6.68□□□□□ -1.34
ATPAF1-203ENST00000460928 ADAMTS13Q76LX8 1427 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 TREHO43280 583 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 ZNF862O60290 1169 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 GSTP1P09211 210 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 XRCC5P13010 732 aaKnown RBP6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 LIG1P18858 919 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 ID3Q02535 119 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 NBPF8Q3BBV2 869 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 WFDC3Q8IUB2 231 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 BCL7CQ8WUZ0 217 aaPredicted RBP6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 MISP3Q96FF7 219 aa6.67□□□□□ -1.34
ATPAF1-203ENST00000460928 WDR89Q96FK6 387 aaPredicted RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms