RNA–Protein interactions for RNA: ENST00000460480.1

SLC6A1-203, Transcript of solute carrier family 6 member 1, humanhuman

TSL 4

Gene SLC6A1, Length 457 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-203ENST00000460480 NUDT12Q9BQG2 462 aa17.87■□□□□ 0.45
SLC6A1-203ENST00000460480 EVI5O60447 810 aa17.86■□□□□ 0.45
SLC6A1-203ENST00000460480 EVX2Q03828 476 aa17.86■□□□□ 0.45
SLC6A1-203ENST00000460480 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
SLC6A1-203ENST00000460480 RPAP2Q8IXW5 612 aaPredicted RBP17.86■□□□□ 0.45
SLC6A1-203ENST00000460480 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.86■□□□□ 0.45
SLC6A1-203ENST00000460480 GTF3C2Q8WUA4 911 aaPredicted RBP17.86■□□□□ 0.45
SLC6A1-203ENST00000460480 RABGAP1Q9Y3P9 1069 aa17.86■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L15C9J2P7 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L13C9JLJ4 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L11C9JVI0 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L18D6R9N7 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L22D6RA61 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L17D6RBQ6 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L19D6RCP7 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L20D6RJB6 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 PDE6AP16499 860 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 CACNB2Q08289 660 aaPredicted RBP17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 USP17L24Q0WX57 530 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 TTF1Q15361 905 aaPredicted RBP17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 SLC9C2Q5TAH2 1124 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 LHX8Q68G74 356 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 LBX2Q6XYB7 198 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 GPR142Q7Z601 462 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 SOCS4Q8WXH5 440 aa17.85■□□□□ 0.45
SLC6A1-203ENST00000460480 MAGEB6P1A0A0J9YX57 407 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 IGHA2P01877 340 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 CCL14Q16627 93 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 ABCB5Q2M3G0 1257 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 PLEKHH3Q7Z736 793 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 TRMT44Q8IYL2 757 aaKnown RBP17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 KIF1BPQ96EK5 621 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 NBPF3Q9H094 633 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 ALPK3Q96L96 1907 aa17.84■□□□□ 0.45
SLC6A1-203ENST00000460480 A0A1W2PPC1 479 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 A0A1W2PRG0 241 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 PRKAR2AP13861 404 aaKnown RBP17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 VCAM1P19320 739 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 USP14P54578 494 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 RAB3GAP1Q15042 981 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 CLASRPQ8N2M8 674 aaKnown RBP17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 GDF15Q99988 308 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 PAGR1Q9BTK6 254 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 BTBD7Q9P203 1132 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 STAP2Q9UGK3 403 aa17.83■□□□□ 0.44
SLC6A1-203ENST00000460480 ZNF532Q9HCE3 1301 aa17.82■□□□□ 0.44
SLC6A1-203ENST00000460480 MS4A1P11836 297 aa17.82■□□□□ 0.44
SLC6A1-203ENST00000460480 SEPT2Q15019 361 aa17.82■□□□□ 0.44
SLC6A1-203ENST00000460480 ZYXQ15942 572 aaKnown RBP17.82■□□□□ 0.44
SLC6A1-203ENST00000460480 SIAH1Q8IUQ4 282 aa17.82■□□□□ 0.44
SLC6A1-203ENST00000460480 EDC3Q96F86 508 aaKnown RBP17.82■□□□□ 0.44
SLC6A1-203ENST00000460480 DCP1AQ9NPI6 582 aaPredicted RBP17.82■□□□□ 0.44
SLC6A1-203ENST00000460480 DDX60LQ5H9U9 1706 aaKnown RBP17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 GOLIM4O00461 696 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 RAB11FIP3O75154 756 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 COL6A1P12109 1028 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 BMP8BP34820 402 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 RGS2P41220 211 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 MAP2K5Q13163 448 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 CRNKL1Q9BZJ0 848 aaKnown RBP17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 CABP5Q9NP86 173 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
SLC6A1-203ENST00000460480 PFASO15067 1338 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 SPDYE16A6NNV3 312 aaPredicted RBP17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 POLR3DP05423 398 aaPredicted RBP17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 HOXC6P09630 235 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 ATP5JP18859 108 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 PTPREP23469 700 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 CCND3P30281 292 aaPredicted RBP17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 PDE3AQ14432 1141 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 SLFNL1Q499Z3 407 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 KIAA1755Q5JYT7 1200 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 LCORLQ8N3X6 602 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 SDR42E1Q8WUS8 393 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 FEZ1Q99689 392 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 C11orf49Q9H6J7 331 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 MCM9Q9NXL9 1143 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 FLRT1Q9NZU1 646 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 DDX19BQ9UMR2 479 aa17.8■□□□□ 0.44
SLC6A1-203ENST00000460480 SLC15A5A6NIM6 579 aa17.79■□□□□ 0.44
SLC6A1-203ENST00000460480 APBB1O00213 710 aa17.79■□□□□ 0.44
SLC6A1-203ENST00000460480 CYP2D6P10635 497 aa17.79■□□□□ 0.44
SLC6A1-203ENST00000460480 ZKSCAN1P17029 563 aaPredicted RBP17.79■□□□□ 0.44
SLC6A1-203ENST00000460480 APBA2Q99767 749 aa17.79■□□□□ 0.44
SLC6A1-203ENST00000460480 RPAP3Q9H6T3 665 aaPredicted RBP17.79■□□□□ 0.44
SLC6A1-203ENST00000460480 SMIM22K7EJ46 135 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 SOX1O00570 391 aaPredicted RBP17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 PRKAB2O43741 272 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 CHGBP05060 677 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 IFIT2P09913 472 aaKnown RBP17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 ADD2P35612 726 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 CCNA1P78396 465 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 GRB14Q14449 540 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 COG2Q14746 738 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 CCAR1Q8IX12 1150 aaKnown RBP17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 SLC44A5Q8NCS7 719 aa17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 DNAJC2Q99543 621 aaKnown RBP17.78■□□□□ 0.44
SLC6A1-203ENST00000460480 RLFQ13129 1914 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 HMMRO75330 724 aa17.77■□□□□ 0.44
SLC6A1-203ENST00000460480 C7orf61Q8IZ16 206 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms