RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 FMNL1O95466 1100 aaPredicted RBP28.43■■■□□ 2.14
U2AF1-204ENST00000459639 SSRP1Q08945 709 aaKnown RBP28.43■■■□□ 2.14
U2AF1-204ENST00000459639 MCTP1Q6DN14 999 aa28.43■■■□□ 2.14
U2AF1-204ENST00000459639 METTL16Q86W50 562 aaKnown RBP28.43■■■□□ 2.14
U2AF1-204ENST00000459639 GMPSP49915 693 aaPredicted RBP28.42■■■□□ 2.14
U2AF1-204ENST00000459639 PNMA1Q8ND90 353 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 CTCFLQ8NI51 663 aaPredicted RBP28.42■■■□□ 2.14
U2AF1-204ENST00000459639 FAM151AQ8WW52 585 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 PHKBQ93100 1093 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 CCDC17Q96LX7 622 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 DNAJC18Q9H819 358 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 ZNF541Q9H0D2 1346 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 AKR1B1P15121 316 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 TRIM22Q8IYM9 498 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 C8orf76Q96K31 380 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 STX8Q9UNK0 236 aa28.42■■■□□ 2.14
U2AF1-204ENST00000459639 TCP10L2B9ZVM9 353 aa28.41■■■□□ 2.14
U2AF1-204ENST00000459639 WNT10BO00744 389 aa28.41■■■□□ 2.14
U2AF1-204ENST00000459639 NBPF11Q86T75 865 aa28.41■■■□□ 2.14
U2AF1-204ENST00000459639 CEP95Q96GE4 821 aa28.41■■■□□ 2.14
U2AF1-204ENST00000459639 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.41■■■□□ 2.14
U2AF1-204ENST00000459639 TRIM34Q9BYJ4 488 aa28.41■■■□□ 2.14
U2AF1-204ENST00000459639 GJA3Q9Y6H8 435 aa28.41■■■□□ 2.14
U2AF1-204ENST00000459639 CNTNAP1P78357 1384 aa28.4■■■□□ 2.14
U2AF1-204ENST00000459639 IGKV6D-41A0A0C4DH26 115 aa28.4■■■□□ 2.14
U2AF1-204ENST00000459639 FAM83AQ86UY5 434 aa28.4■■■□□ 2.14
U2AF1-204ENST00000459639 WASF1Q92558 559 aa28.4■■■□□ 2.14
U2AF1-204ENST00000459639 TMEM47Q9BQJ4 181 aa28.4■■■□□ 2.14
U2AF1-204ENST00000459639 SLC26A6Q9BXS9 759 aa28.4■■■□□ 2.14
U2AF1-204ENST00000459639 KIF5BP33176 963 aa28.39■■■□□ 2.14
U2AF1-204ENST00000459639 ALG1Q9BT22 464 aa28.39■■■□□ 2.14
U2AF1-204ENST00000459639 ZSCAN16Q9H4T2 348 aaPredicted RBP28.39■■■□□ 2.14
U2AF1-204ENST00000459639 SHTN1A0MZ66 631 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 TOP1P11387 765 aaKnown RBP28.38■■■□□ 2.13
U2AF1-204ENST00000459639 RESTQ13127 1097 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 TATDN1Q6P1N9 297 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 TMTC3Q6ZXV5 915 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 FERMT3Q86UX7 667 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 MICALL2Q8IY33 904 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 CSRNP1Q96S65 589 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 RNF26Q9BY78 433 aaPredicted RBP28.38■■■□□ 2.13
U2AF1-204ENST00000459639 VEZTQ9HBM0 779 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 MTMR4Q9NYA4 1195 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 MYH4Q9Y623 1939 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 FOSBP53539 338 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 PPP4R3BQ5MIZ7 849 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 FBXO18Q8NFZ0 1043 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 CHAMP1Q96JM3 812 aa28.38■■■□□ 2.13
U2AF1-204ENST00000459639 DEXIO95424 95 aa28.37■■■□□ 2.13
U2AF1-204ENST00000459639 FUT2Q10981 343 aa28.37■■■□□ 2.13
U2AF1-204ENST00000459639 GRM4Q14833 912 aa28.37■■■□□ 2.13
U2AF1-204ENST00000459639 NBPF9Q3BBW0 867 aa28.37■■■□□ 2.13
U2AF1-204ENST00000459639 HERC5Q9UII4 1024 aaKnown RBP28.37■■■□□ 2.13
U2AF1-204ENST00000459639 CNOT7Q9UIV1 285 aaKnown RBP28.37■■■□□ 2.13
U2AF1-204ENST00000459639 FOXD4L6Q3SYB3 417 aaPredicted RBP28.36■■■□□ 2.13
U2AF1-204ENST00000459639 FOXD4L3Q6VB84 417 aaPredicted RBP28.36■■■□□ 2.13
U2AF1-204ENST00000459639 PLEKHA8P1O95397 391 aa28.35■■■□□ 2.13
U2AF1-204ENST00000459639 CERKLQ49MI3 558 aaPredicted RBP28.35■■■□□ 2.13
U2AF1-204ENST00000459639 GPC2Q8N158 579 aa28.35■■■□□ 2.13
U2AF1-204ENST00000459639 CMTR1Q8N1G2 835 aaKnown RBP28.35■■■□□ 2.13
U2AF1-204ENST00000459639 FAM196BA6NMK8 535 aa28.34■■■□□ 2.13
U2AF1-204ENST00000459639 PRPF3O43395 683 aaKnown RBP28.34■■■□□ 2.13
U2AF1-204ENST00000459639 YBX3P16989 372 aaKnown RBP eCLIP28.34■■■□□ 2.13
U2AF1-204ENST00000459639 TNNI2P48788 182 aa28.34■■■□□ 2.13
U2AF1-204ENST00000459639 GNAQP50148 359 aa28.34■■■□□ 2.13
U2AF1-204ENST00000459639 GUCY1B3Q02153 619 aa28.34■■■□□ 2.13
U2AF1-204ENST00000459639 CNTNAP5Q8WYK1 1306 aa28.34■■■□□ 2.13
U2AF1-204ENST00000459639 LMBRD1Q9NUN5 540 aa28.34■■■□□ 2.13
U2AF1-204ENST00000459639 TTLL1O95922 423 aa28.33■■■□□ 2.13
U2AF1-204ENST00000459639 SLURP2P0DP57 97 aa28.33■■■□□ 2.13
U2AF1-204ENST00000459639 AKAP17AQ02040 695 aaKnown RBP28.33■■■□□ 2.13
U2AF1-204ENST00000459639 DNM1Q05193 864 aaKnown RBP28.33■■■□□ 2.13
U2AF1-204ENST00000459639 TMEM87AQ8NBN3 555 aa28.33■■■□□ 2.13
U2AF1-204ENST00000459639 AIFM3Q96NN9 605 aa28.33■■■□□ 2.13
U2AF1-204ENST00000459639 MPHOSPH10O00566 681 aaKnown RBP28.32■■■□□ 2.12
U2AF1-204ENST00000459639 TNFAIP1Q13829 316 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 TRIM29Q14134 588 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 SKOR2Q2VWA4 1001 aaPredicted RBP28.32■■■□□ 2.12
U2AF1-204ENST00000459639 CCDC82Q8N4S0 544 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 TRAK2O60296 914 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 EGFRP00533 1210 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 KIF4BQ2VIQ3 1234 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 SRBD1Q8N5C6 995 aaKnown RBP28.32■■■□□ 2.12
U2AF1-204ENST00000459639 MAD2L2Q9UI95 211 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 CNPY2Q9Y2B0 182 aa28.32■■■□□ 2.12
U2AF1-204ENST00000459639 H7C1D1 291 aa28.31■■■□□ 2.12
U2AF1-204ENST00000459639 KRT85P78386 507 aa28.31■■■□□ 2.12
U2AF1-204ENST00000459639 RBM26Q5T8P6 1007 aaKnown RBP28.31■■■□□ 2.12
U2AF1-204ENST00000459639 KRT40Q6A162 431 aa28.31■■■□□ 2.12
U2AF1-204ENST00000459639 OTUD7BQ6GQQ9 843 aa28.31■■■□□ 2.12
U2AF1-204ENST00000459639 RBM27Q9P2N5 1060 aaKnown RBP28.31■■■□□ 2.12
U2AF1-204ENST00000459639 PRPF40AO75400 957 aaKnown RBP28.3■■■□□ 2.12
U2AF1-204ENST00000459639 GUCY1A2P33402 732 aa28.3■■■□□ 2.12
U2AF1-204ENST00000459639 CSPP1Q1MSJ5 1256 aa28.3■■■□□ 2.12
U2AF1-204ENST00000459639 TMEM179Q6ZVK1 233 aa28.3■■■□□ 2.12
U2AF1-204ENST00000459639 SAMD7Q7Z3H4 446 aa28.3■■■□□ 2.12
U2AF1-204ENST00000459639 LZTS2Q9BRK4 669 aa28.3■■■□□ 2.12
U2AF1-204ENST00000459639 TMEM39BQ9GZU3 492 aa28.3■■■□□ 2.12
U2AF1-204ENST00000459639 XPO5Q9HAV4 1204 aaKnown RBP eCLIP28.3■■■□□ 2.12
U2AF1-204ENST00000459639 PGAP2Q9UHJ9 254 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms