RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 CABP5Q9NP86 173 aa19.15■□□□□ 0.66
CCDC43-202ENST00000457422 V9GY48 417 aaPredicted RBP19.15■□□□□ 0.66
CCDC43-202ENST00000457422 PPP4CP60510 307 aa19.14■□□□□ 0.65
CCDC43-202ENST00000457422 GPSM2P81274 684 aa19.14■□□□□ 0.65
CCDC43-202ENST00000457422 PNOCQ13519 176 aa19.14■□□□□ 0.65
CCDC43-202ENST00000457422 GRIK5Q16478 980 aa19.14■□□□□ 0.65
CCDC43-202ENST00000457422 C12orf60Q5U649 245 aa19.14■□□□□ 0.65
CCDC43-202ENST00000457422 TRPC5Q9UL62 973 aaPredicted RBP19.14■□□□□ 0.65
CCDC43-202ENST00000457422 FAM205CA6NFA0 338 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 GYS1P13807 737 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 MDM2Q00987 491 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-202ENST00000457422 SH3RF3Q8TEJ3 882 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-202ENST00000457422 HOOK1Q9UJC3 728 aaKnown RBP19.13■□□□□ 0.65
CCDC43-202ENST00000457422 CDK5RAP2Q96SN8 1893 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 TSPY2A6NKD2 308 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 ATP2B1P20020 1258 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 USP5P45974 858 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 DIXDC1Q155Q3 683 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 ISM2Q6H9L7 571 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 RCSD1Q6JBY9 416 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 SRBD1Q8N5C6 995 aaKnown RBP19.13■□□□□ 0.65
CCDC43-202ENST00000457422 MYRIPQ8NFW9 859 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 TNFRSF25Q93038 417 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 BRMS1Q9HCU9 246 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 IMPACTQ9P2X3 320 aa19.13■□□□□ 0.65
CCDC43-202ENST00000457422 TRIM75PA6NK02 468 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 DYNC1I1O14576 645 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 BAG3O95817 575 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 BMP15O95972 392 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 NPY5RQ15761 445 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 CERS3Q8IU89 383 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 ANKS1AQ92625 1134 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 OSBPL5Q9H0X9 879 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-202ENST00000457422 LDHCP07864 332 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 GSDMDP57764 484 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 ST5P78524 1137 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 EARS2Q5JPH6 523 aaKnown RBP19.12■□□□□ 0.65
CCDC43-202ENST00000457422 NT5DC1Q5TFE4 455 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 DGKHQ86XP1 1220 aa19.12■□□□□ 0.65
CCDC43-202ENST00000457422 FOXP4Q8IVH2 680 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-202ENST00000457422 DDX60LQ5H9U9 1706 aaKnown RBP19.11■□□□□ 0.65
CCDC43-202ENST00000457422 UFL1O94874 794 aa19.11■□□□□ 0.65
CCDC43-202ENST00000457422 SERPINB2P05120 415 aa19.11■□□□□ 0.65
CCDC43-202ENST00000457422 ATP2B4P23634 1241 aa19.11■□□□□ 0.65
CCDC43-202ENST00000457422 HSPA1LP34931 641 aa19.11■□□□□ 0.65
CCDC43-202ENST00000457422 SLC27A3Q5K4L6 730 aa19.11■□□□□ 0.65
CCDC43-202ENST00000457422 PCDHA5Q9Y5H7 936 aa19.11■□□□□ 0.65
CCDC43-202ENST00000457422 MYO1BO43795 1136 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 KIF5BP33176 963 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 MYL5Q02045 173 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 CCDC178Q5BJE1 867 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 DYNLL2Q96FJ2 89 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 HSD3B7Q9H2F3 369 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 LRRC37AA6NMS7 1700 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 FOXN1O15353 648 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 IL1R1P14778 569 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 GTF2F1P35269 517 aaKnown RBP eCLIP19.1■□□□□ 0.65
CCDC43-202ENST00000457422 ARID5BQ14865 1188 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 POSTNQ15063 836 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 KANK3Q6NY19 840 aa19.1■□□□□ 0.65
CCDC43-202ENST00000457422 RBM17Q96I25 401 aaKnown RBP19.1■□□□□ 0.65
CCDC43-202ENST00000457422 LTBP1Q14766 1721 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 POLR2DO15514 142 aaKnown RBP19.09■□□□□ 0.65
CCDC43-202ENST00000457422 SCG2P13521 617 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 TFAP4Q01664 338 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 PFKFB3Q16875 520 aaPredicted RBP19.09■□□□□ 0.65
CCDC43-202ENST00000457422 OLFM4Q6UX06 510 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 AMOTL1Q8IY63 956 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 XPO4Q9C0E2 1151 aaKnown RBP19.09■□□□□ 0.65
CCDC43-202ENST00000457422 CSRNP2Q9H175 543 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 CD209Q9NNX6 404 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 TCP11L1Q9NUJ3 509 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 PODXL2Q9NZ53 605 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 HOXA10P31260 410 aaPredicted RBP19.09■□□□□ 0.65
CCDC43-202ENST00000457422 SARSP49591 514 aaKnown RBP19.09■□□□□ 0.65
CCDC43-202ENST00000457422 DHX8Q14562 1220 aaKnown RBP19.09■□□□□ 0.65
CCDC43-202ENST00000457422 FERMT2Q96AC1 680 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 RTFDC1Q9BY42 306 aaPredicted RBP19.09■□□□□ 0.65
CCDC43-202ENST00000457422 KAT14Q9H8E8 782 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 IL17RBQ9NRM6 502 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 IFNKQ9P0W0 207 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 GGA1Q9UJY5 639 aa19.09■□□□□ 0.65
CCDC43-202ENST00000457422 ACTN4O43707 911 aaKnown RBP19.08■□□□□ 0.64
CCDC43-202ENST00000457422 BBOX1O75936 387 aa19.08■□□□□ 0.64
CCDC43-202ENST00000457422 SMC2O95347 1197 aa19.08■□□□□ 0.64
CCDC43-202ENST00000457422 CCZ1BP86790 482 aa19.08■□□□□ 0.64
CCDC43-202ENST00000457422 CCZ1P86791 482 aaPredicted RBP19.08■□□□□ 0.64
CCDC43-202ENST00000457422 NOM1Q5C9Z4 860 aaKnown RBP19.08■□□□□ 0.64
CCDC43-202ENST00000457422 FILIP1Q7Z7B0 1213 aa19.08■□□□□ 0.64
CCDC43-202ENST00000457422 TRIML1Q8N9V2 468 aa19.08■□□□□ 0.64
CCDC43-202ENST00000457422 TGFBRAP1Q8WUH2 860 aa19.08■□□□□ 0.64
CCDC43-202ENST00000457422 SERTAD1Q9UHV2 236 aa19.08■□□□□ 0.64
CCDC43-202ENST00000457422 WNT7AO00755 349 aa19.07■□□□□ 0.64
CCDC43-202ENST00000457422 BMP6P22004 513 aa19.07■□□□□ 0.64
CCDC43-202ENST00000457422 TRAPPC10P48553 1259 aa19.07■□□□□ 0.64
CCDC43-202ENST00000457422 DDR1Q08345 913 aa19.07■□□□□ 0.64
CCDC43-202ENST00000457422 FANCCQ00597 558 aa19.07■□□□□ 0.64
CCDC43-202ENST00000457422 USP49Q70CQ1 688 aa19.07■□□□□ 0.64
CCDC43-202ENST00000457422 SPATA20Q8TB22 786 aa19.07■□□□□ 0.64
CCDC43-202ENST00000457422 MAN1B1Q9UKM7 699 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms