RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 DSCC1Q9BVC3 393 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 MCOLN1Q9GZU1 580 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 PICK1Q9NRD5 415 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 GINM1Q9NU53 330 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 KCNH4Q9UQ05 1017 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 AFG3L2Q9Y4W6 797 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 ZHX2Q9Y6X8 837 aa11.99□□□□□ -0.49
ATG4A-206ENST00000457035 ROBO3Q96MS0 1386 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 ZMYM6O95789 1325 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 RAD50Q92878 1312 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 TESPA1A2RU30 521 aaPredicted RBP11.98□□□□□ -0.49
ATG4A-206ENST00000457035 MANSC4A6NHS7 340 aaPredicted RBP11.98□□□□□ -0.49
ATG4A-206ENST00000457035 CXCL11O14625 94 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 ASNSP08243 561 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 GUCY1A2P33402 732 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 INHBEP58166 350 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 PPARAQ07869 468 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 CCDC84Q86UT8 332 aaPredicted RBP11.98□□□□□ -0.49
ATG4A-206ENST00000457035 TMEM106CQ9BVX2 250 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 METRNQ9UJH8 293 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 ANAPC4Q9UJX5 808 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 TACC3Q9Y6A5 838 aa11.98□□□□□ -0.49
ATG4A-206ENST00000457035 USP17L5A8MUK1 530 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 GH2P01242 217 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 FGRP09769 529 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 GTF2A2P52657 109 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 PTH1RQ03431 593 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 ABCB5Q2M3G0 1257 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 STK11IPQ8N1F8 1099 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 CCDC17Q96LX7 622 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 PTPN18Q99952 460 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 ESYT1Q9BSJ8 1104 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 WDR18Q9BV38 432 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 INCENPQ9NQS7 918 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 ZBTB21Q9ULJ3 1066 aa11.97□□□□□ -0.49
ATG4A-206ENST00000457035 GREB1LQ9C091 1923 aaPredicted RBP11.96□□□□□ -0.49
ATG4A-206ENST00000457035 AKR1B1P15121 316 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 RASA1P20936 1047 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 MLLT1Q03111 559 aaPredicted RBP11.96□□□□□ -0.49
ATG4A-206ENST00000457035 CTDSPL2Q05D32 466 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 SPP2Q13103 211 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 SNAPC2Q13487 334 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 MOGSQ13724 837 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 SEPT2Q15019 361 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 ZNF280CQ8ND82 737 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 BRI3BPQ8WY22 251 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.96□□□□□ -0.49
ATG4A-206ENST00000457035 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 MKNK2Q9HBH9 465 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 CABP5Q9NP86 173 aa11.96□□□□□ -0.49
ATG4A-206ENST00000457035 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.96□□□□□ -0.49
ATG4A-206ENST00000457035 A0A0G2JLL6 359 aaPredicted RBP11.95□□□□□ -0.5
ATG4A-206ENST00000457035 IGF2BP3O00425 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
ATG4A-206ENST00000457035 CDC45O75419 566 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 PRDM1O75626 825 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 TRPA1O75762 1119 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 SLC3A2P08195 630 aaKnown RBP11.95□□□□□ -0.5
ATG4A-206ENST00000457035 CETPP11597 493 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 PDE4BQ07343 736 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 SREBF2Q12772 1141 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 PRRT2Q7Z6L0 340 aaPredicted RBP11.95□□□□□ -0.5
ATG4A-206ENST00000457035 SIAH1Q8IUQ4 282 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 MAP4K1Q92918 833 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 NBPF3Q9H094 633 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 CTNNA3Q9UI47 895 aa11.95□□□□□ -0.5
ATG4A-206ENST00000457035 MYH4Q9Y623 1939 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 CCL15-CCL14A0A0B4J2E2 113 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 TRIM75PA6NK02 468 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 MPHOSPH10O00566 681 aaKnown RBP11.94□□□□□ -0.5
ATG4A-206ENST00000457035 ZNF213O14771 459 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 BACE1P56817 501 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 HAND2P61296 217 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 RAB3GAP1Q15042 981 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 CCL15Q16663 113 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 TMEM179Q6ZVK1 233 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
ATG4A-206ENST00000457035 LSG1Q9H089 658 aaKnown RBP11.94□□□□□ -0.5
ATG4A-206ENST00000457035 AS3MTQ9HBK9 375 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 RNF186Q9NXI6 227 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 LAMA4Q16363 1823 aa11.94□□□□□ -0.5
ATG4A-206ENST00000457035 IGKV6D-41A0A0C4DH26 115 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 C19orf81C9J6K1 198 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 BTBD19C9JJ37 291 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 USP17L10C9JJH3 530 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 ORC4O43929 436 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 SH3D19Q5HYK7 790 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 AKNAD1Q5T1N1 836 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 GPAT2Q6NUI2 795 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 FAM43AQ8N2R8 423 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 NEDD1Q8NHV4 660 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 NKX2-3Q8TAU0 364 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 ACER1Q8TDN7 264 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 STAG1Q8WVM7 1258 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 SAGE1Q9NXZ1 904 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 GTF3C3Q9Y5Q9 886 aa11.93□□□□□ -0.5
ATG4A-206ENST00000457035 A0A1W2PRG0 241 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 POTEB2H3BUK9 544 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 TFAP4Q01664 338 aa11.92□□□□□ -0.5
ATG4A-206ENST00000457035 IMMTQ16891 758 aaKnown RBP11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms