RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 USP17L13C9JLJ4 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L12C9JPN9 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L11C9JVI0 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L21D6R901 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L18D6R9N7 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L22D6RA61 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L17D6RBQ6 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L19D6RCP7 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L20D6RJB6 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 MPHOSPH10O00566 681 aaKnown RBP21.45■■□□□ 1.02
MSH6-207ENST00000456246 RNF113AO15541 343 aaKnown RBP21.45■■□□□ 1.02
MSH6-207ENST00000456246 CYP2D6P10635 497 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 GNAT2P19087 354 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 MX1P20591 662 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 USP17L24Q0WX57 530 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 TSHZ3Q63HK5 1081 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 GPRC5AQ8NFJ5 357 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 P2RX7Q99572 595 aaKnown RBP21.45■■□□□ 1.02
MSH6-207ENST00000456246 GABRQQ9UN88 632 aa21.45■■□□□ 1.02
MSH6-207ENST00000456246 CHGBP05060 677 aa21.44■■□□□ 1.02
MSH6-207ENST00000456246 GUCY1A2P33402 732 aa21.44■■□□□ 1.02
MSH6-207ENST00000456246 SEPT2Q15019 361 aa21.44■■□□□ 1.02
MSH6-207ENST00000456246 NKX2-3Q8TAU0 364 aa21.44■■□□□ 1.02
MSH6-207ENST00000456246 PI4K2BQ8TCG2 481 aa21.44■■□□□ 1.02
MSH6-207ENST00000456246 STRBPQ96SI9 672 aaKnown RBP21.44■■□□□ 1.02
MSH6-207ENST00000456246 SH2D4AQ9H788 454 aa21.44■■□□□ 1.02
MSH6-207ENST00000456246 BIN2Q9UBW5 565 aaPredicted RBP21.44■■□□□ 1.02
MSH6-207ENST00000456246 ADCY3O60266 1144 aa21.43■■□□□ 1.02
MSH6-207ENST00000456246 VCAM1P19320 739 aa21.43■■□□□ 1.02
MSH6-207ENST00000456246 EN2P19622 333 aaPredicted RBP21.43■■□□□ 1.02
MSH6-207ENST00000456246 ZYXQ15942 572 aaKnown RBP21.43■■□□□ 1.02
MSH6-207ENST00000456246 C16orf86Q6ZW13 317 aa21.43■■□□□ 1.02
MSH6-207ENST00000456246 SLC44A5Q8NCS7 719 aa21.43■■□□□ 1.02
MSH6-207ENST00000456246 ACER1Q8TDN7 264 aa21.43■■□□□ 1.02
MSH6-207ENST00000456246 CAPN2P17655 700 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 MAPK4P31152 587 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 EVX2Q03828 476 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 SBK1Q52WX2 424 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 ANKRD45Q5TZF3 282 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 OSBP2Q969R2 916 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 DYNLL2Q96FJ2 89 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 ARHGEF10LQ9HCE6 1279 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 BRCA2P51587 3418 aa21.42■■□□□ 1.02
MSH6-207ENST00000456246 DOCK3Q8IZD9 2030 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 GPAA1O43292 621 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 MYCP01106 439 aaPredicted RBP21.41■■□□□ 1.02
MSH6-207ENST00000456246 CDK8P49336 464 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 ERVK-9P63128 1117 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 ERVK-24P63145 666 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 PRPF38BQ5VTL8 546 aaKnown RBP21.41■■□□□ 1.02
MSH6-207ENST00000456246 CTR9Q6PD62 1173 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 LBX2Q6XYB7 198 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 CATSPERGQ6ZRH7 1159 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 CCAR1Q8IX12 1150 aaKnown RBP21.41■■□□□ 1.02
MSH6-207ENST00000456246 SOCS4Q8WXH5 440 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 LPAR1Q92633 364 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 FSD1Q9BTV5 496 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 RABGAP1Q9Y3P9 1069 aa21.41■■□□□ 1.02
MSH6-207ENST00000456246 SALL3Q9BXA9 1300 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 GJB1P08034 283 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 CCL5P13501 91 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 CCNA1P78396 465 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 ICA1Q05084 483 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 MTFR1Q15390 333 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 OTUD7AQ8TE49 926 aaPredicted RBP21.4■■□□□ 1.02
MSH6-207ENST00000456246 TXNRD2Q9NNW7 524 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 RBPJLQ9UBG7 517 aa21.4■■□□□ 1.02
MSH6-207ENST00000456246 ROBO3Q96MS0 1386 aa21.39■■□□□ 1.02
MSH6-207ENST00000456246 CYP2D7A0A087X1C5 515 aa21.39■■□□□ 1.01
MSH6-207ENST00000456246 GSG1L2A8MUP6 293 aa21.39■■□□□ 1.01
MSH6-207ENST00000456246 AKR1B1P15121 316 aa21.39■■□□□ 1.01
MSH6-207ENST00000456246 RNF208Q9H0X6 261 aa21.39■■□□□ 1.01
MSH6-207ENST00000456246 ZNF287Q9HBT7 754 aa21.39■■□□□ 1.01
MSH6-207ENST00000456246 INHAP05111 366 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 ELNP15502 786 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 GJA8P48165 433 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 TICAM2Q86XR7 235 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 NUDT12Q9BQG2 462 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 PAGR1Q9BTK6 254 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 NACAP1Q9BZK3 213 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 RWDD1Q9H446 243 aaPredicted RBP21.38■■□□□ 1.01
MSH6-207ENST00000456246 RPAP3Q9H6T3 665 aaPredicted RBP21.38■■□□□ 1.01
MSH6-207ENST00000456246 KANSL2Q9H9L4 492 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 STAP2Q9UGK3 403 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 GJD2Q9UKL4 321 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 TMX2Q9Y320 296 aa21.38■■□□□ 1.01
MSH6-207ENST00000456246 A0A1W2PRG0 241 aa21.37■■□□□ 1.01
MSH6-207ENST00000456246 TDO2P48775 406 aa21.37■■□□□ 1.01
MSH6-207ENST00000456246 HOXC10Q9NYD6 342 aa21.37■■□□□ 1.01
MSH6-207ENST00000456246 PATL2C9JE40 543 aaKnown RBP21.36■■□□□ 1.01
MSH6-207ENST00000456246 HMGCRP04035 888 aa21.36■■□□□ 1.01
MSH6-207ENST00000456246 XRCC5P13010 732 aaKnown RBP21.36■■□□□ 1.01
MSH6-207ENST00000456246 TRMT44Q8IYL2 757 aaKnown RBP21.36■■□□□ 1.01
MSH6-207ENST00000456246 EVI5LQ96CN4 794 aa21.36■■□□□ 1.01
MSH6-207ENST00000456246 CWC22Q9HCG8 908 aaKnown RBP21.36■■□□□ 1.01
MSH6-207ENST00000456246 MKI67P46013 3256 aaKnown RBP21.35■■□□□ 1.01
MSH6-207ENST00000456246 SPDYE16A6NNV3 312 aaPredicted RBP21.35■■□□□ 1.01
MSH6-207ENST00000456246 M0R2C6 588 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 APPP05067 770 aa21.35■■□□□ 1.01
MSH6-207ENST00000456246 PDE1AP54750 535 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms